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DFT-D4 对苯并[7]轮烷包合苯丙胺和甲基苯丙胺的深入研究:能量学、结构和生物传感性能。

DFT-D4 Insight into the Inclusion of Amphetamine and Methamphetamine in Cucurbit[7]uril: Energetic, Structural and Biosensing Properties.

机构信息

Laboratory of Sensors, Instrumentations and Process (LCIP), University of Abbes Laghrour, Khenchela 40000, Algeria.

Department of Petrochemical and Process Engineering, Faculty of Technology, 20 August 1955 University of Skikda, El Hadaik Road, Skikda 21000, Algeria.

出版信息

Molecules. 2021 Dec 10;26(24):7479. doi: 10.3390/molecules26247479.

Abstract

The host-guest interactions of cucurbit[7]uril (CB[7]) as host and amphetamine (AMP), methamphetamine (MET) and their enantiomeric forms (S-form and R-form) as guests were computationally investigated using density functional theory calculations with the recent D4 atomic-charge dependent dispersion corrections. The analysis of energetic, structural and electronic properties with the aid of frontier molecular orbital analysis, charge decomposition analysis (CDA), extended charge decomposition analysis (ECDA) and independent gradient model (IGM) approach allowed to characterize the host-guest interactions in the studied systems. Energetic results indicate the formation of stable non-covalent complexes where R-AMP@CB[7] and S-AMP@CB[7] are more stable thermodynamically than R-MET@CB[7] and S-MET@CB[7] in gas phase while the reverse is true in water solvent. Based on structural analysis, a recognition mechanism is proposed, which suggests that the synergistic effect of van der Waals forces, ion-dipole interactions, intermolecular charge transfer interactions and intermolecular hydrogen bonding is responsible for the stabilization of the complexes. The geometries of the complexes obtained theoretically are in good agreement with the X-ray experimental structures and indicate that the phenyl ring of amphetamine and methamphetamine is deeply buried into the cavity of CB[7] through hydrophobic interactions while the ammonium group remains outside the cavity to establish hydrogen bonds with the portal oxygen atoms of CB[7].

摘要

使用最新的 D4 原子电荷相关色散校正的密度泛函理论计算,对葫芦脲[7](CB[7])作为主体与苯丙胺(AMP)、甲基苯丙胺(MET)及其对映异构体(S 型和 R 型)作为客体的主体-客体相互作用进行了计算研究。借助前沿分子轨道分析、电荷分解分析(CDA)、扩展电荷分解分析(ECDA)和独立梯度模型(IGM)方法对能量、结构和电子性质的分析,使我们能够对研究体系中的主体-客体相互作用进行了表征。能量学结果表明,形成了稳定的非共价配合物,其中 R-AMP@CB[7]和 S-AMP@CB[7]在气相中比 R-MET@CB[7]和 S-MET@CB[7]热力学上更稳定,而在水溶剂中则相反。基于结构分析,提出了一种识别机制,该机制表明范德华力、离子偶极力、分子间电荷转移相互作用和分子间氢键的协同作用是稳定配合物的原因。通过理论获得的配合物的几何形状与 X 射线实验结构非常吻合,表明苯丙胺和甲基苯丙胺的苯基环通过疏水相互作用深深地埋藏在 CB[7]的空腔中,而铵基留在空腔外与 CB[7]的门户氧原子形成氢键。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/041e/8705717/e0f420aaa36a/molecules-26-07479-g001.jpg

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