Laboratory of Molecular Systematics, Limnological Institute, 664033 Irkutsk, Russia.
Belozersky Institute for Physicochemical Biology, Lomonosov Moscow State University, 119991 Moscow, Russia.
Genes (Basel). 2021 Dec 20;12(12):2030. doi: 10.3390/genes12122030.
There are more than 350 species of amphipods (Crustacea) in Lake Baikal, which have emerged predominantly through the course of endemic radiation. This group represents a remarkable model for studying various aspects of evolution, one of which is the evolution of mitochondrial (mt) genome architectures. We sequenced and assembled the mt genome of a pelagic Baikalian amphipod species The mt genome is revealed to have an extraordinary length (42,256 bp), deviating significantly from the genomes of other amphipod species and the majority of animals. The mt genome of has a unique gene order within amphipods, duplications of the four tRNA genes and , and a long non-coding region, that makes up about two thirds of the genome's size. The extension of the mt genome was most likely caused by multiple duplications and inversions of regions harboring ribosomal RNA genes. In this study, we analyzed the patterns of mt genome length changes in amphipods and other animal phyla. Through a statistical analysis, we demonstrated that the variability in the mt genome length may be a characteristic of certain phyla and is primarily conferred by expansions of non-coding regions.
贝加尔湖中有超过 350 种端足目动物(甲壳纲),它们主要通过特有辐射进化而来。这个群体是研究进化各个方面的一个显著模型,其中之一是线粒体(mt)基因组结构的进化。我们对一种浮游贝加尔湖端足目动物的 mt 基因组进行了测序和组装。mt 基因组的长度非常长(42256bp),与其他端足目动物和大多数动物的基因组有很大的不同。 在端足目中, 的 mt 基因组具有独特的基因排列,四个 tRNA 基因和 发生了重复,并且存在一个长的非编码区,约占基因组大小的三分之二。mt 基因组的扩展很可能是由核糖体 RNA 基因所在区域的多次重复和倒位引起的。在这项研究中,我们分析了端足目动物和其他动物门的 mt 基因组长度变化模式。通过统计分析,我们证明 mt 基因组长度的可变性可能是某些门的特征,主要是由非编码区的扩展所致。