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中国武汉耐碳青霉烯类肺炎克雷伯菌血流感染的分子流行病学及危险因素

Molecular Epidemiology and Risk Factors of Carbapenem-Resistant Klebsiella Pneumoniae Bloodstream Infections in Wuhan, China.

作者信息

Liu Chan, Liu Lan, Jin Ming-Ming, Hu Yang-Bo, Cai Xuan, Wan Lu, Zhang Hai-Yue, Li Rui-Yun, Wu Xiao-Jun

机构信息

Department of Respiratory and Critical Care Medicine, Renmin Hospital of Wuhan University, Wuhan, 430060, China.

State Key Laboratory of Virology, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, 430060, China.

出版信息

Curr Med Sci. 2022 Feb;42(1):68-76. doi: 10.1007/s11596-021-2480-5. Epub 2022 Jan 4.

Abstract

OBJECTIVE

The clinical characteristics and microbiological data of patients with K. pneumoniae bloodstream infections (BSI) from January 2018 to December 2020 were retrospectively analyzed to study the molecular epidemiology of Carbapenem-resistant Klebsiella pneumoniae (CRKP). We also aimed to identify the risk factors for the development of CRKP BSI.

METHODS

This retrospective study was conducted at Renmin Hospital of Wuhan University from January 2018 to December 2020. The date of non-duplicate K. pneumoniae isolates isolated from blood samples was identified using the microbiology laboratory database. The data from patients diagnosed with K. pneumoniae BSI were collected and analyzed.

RESULTS

From 2018 to 2020, there were 510 non-duplicated K. pneumoniae blood isolates, mainly distributed in the intensive care unit (ICU) (28.4%), that were identified in our research. These cases included 77 strains of CRKP and 433 strains of carbapenem-susceptible K. pneumoniae (CSKP). The resistance rate of K. pneumoniae to meropenem and imipenem increased from 11.2% in 2018 to 27.1% in 2020. Moreover, Compared with CSKP, all CRKP isolates showed multi-resistance to tested antibiotics. The phylogenetic analysis showed that the CRKP isolates could be grouped into four major clades, and multilocus sequence typing revealed that the isolates had considerable clonality. Overall, 8 sequence types (STs) of CRKP were detected, of which ST11 comprised the majority and clustered into clade 3. The most prevalent carbapenemase gene was bla (87%) among the CRKP isolates, followed by bla (9.1%) and bla (1.3%). A total of 74 (16.6%) patients with CRKP BSI and 373 (83.4%) patients with CSKP BSI were categorized as the case and control groups. The mortality in the CRKP group was 44.6%, and 11.5% in CSKP group (P<0.001). A multivariate analysis that a long hospital stay before BSI (OR=1.42, 95% CI 1.02-4.31, P=0.011), ICU hospitalization history (OR=3.30, 95% CI 1.35-8.05, P=0.002), and prior use of carbapenems (OR=3.33, 95% CI 1.29-7.27, P=0.001) and antifungals (OR=2.81, 95% CI 1.24-6.04, P<0.001) were independent risk factors for CRKP BSI.

CONCLUSION

ST11 is the predominant type of CRKP mediating inter-hospital transmission, and bla is the main carbapenemase gene harboured by CRKP blood isolates. ICU stay, prolonged hospitalization before BSI, and prior use of carbapenems and antifungals were independent risk factors for acquiring CRKP BSI. Our study may provide insights into early infection control practices.

摘要

目的

回顾性分析2018年1月至2020年12月期间肺炎克雷伯菌血流感染(BSI)患者的临床特征和微生物学数据,以研究耐碳青霉烯类肺炎克雷伯菌(CRKP)的分子流行病学。我们还旨在确定CRKP BSI发生的危险因素。

方法

本回顾性研究于2018年1月至2020年12月在武汉大学人民医院进行。使用微生物实验室数据库确定从血样中分离出的非重复肺炎克雷伯菌分离株的日期。收集并分析诊断为肺炎克雷伯菌BSI患者的数据。

结果

2018年至2020年,我们的研究共鉴定出510株非重复的肺炎克雷伯菌血分离株,主要分布在重症监护病房(ICU)(28.4%)。这些病例包括77株CRKP和433株对碳青霉烯类敏感的肺炎克雷伯菌(CSKP)。肺炎克雷伯菌对美罗培南和亚胺培南的耐药率从2018年的11.2%上升至2020年的27.1%。此外,与CSKP相比,所有CRKP分离株对测试抗生素均表现出多重耐药性。系统发育分析表明,CRKP分离株可分为四个主要分支,多位点序列分型显示分离株具有相当的克隆性。总体而言,检测到8种CRKP序列类型(STs),其中ST11占大多数并聚集在分支3中。CRKP分离株中最常见的碳青霉烯酶基因是bla(87%),其次是bla(9.1%)和bla(1.3%)。共有74例(16.6%)CRKP BSI患者和373例(83.4%)CSKP BSI患者被分为病例组和对照组。CRKP组的死亡率为44.6%,CSKP组为11.5%(P<0.001)。多因素分析显示,BSI前住院时间长(OR=1.42,95%CI 1.02-4.31,P=0.011)(OR=3.30,95%CI 1.35-8.05,P=0.002)以及先前使用碳青霉烯类药物(OR=3.33,95%CI 1.29-7.27,P=0.001)和抗真菌药物(OR=2.81,95%CI 1.24-6.04,P<0.001)是CRKP BSI的独立危险因素。

结论

ST11是介导医院间传播的CRKP的主要类型,bla是CRKP血分离株携带的主要碳青霉烯酶基因。入住ICU、BSI前住院时间延长以及先前使用碳青霉烯类药物和抗真菌药物是获得CRKP BSI的独立危险因素。我们的研究可能为早期感染控制措施提供见解。

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