Zhao Lei, Lv Fengfeng, Zheng Ye, Yan Liqiu, Cao Xufen
Department of Cardiology, Cangzhou Central Hospital, Cangzhou, China.
Front Mol Biosci. 2022 Jan 13;8:792540. doi: 10.3389/fmolb.2021.792540. eCollection 2021.
Advancing age is a major risk factor of atherosclerosis (AS). Nevertheless, the mechanism underlying this phenomenon remains indistinct. Herein, this study conducted a comprehensive analysis of the biological implications of aging-related genes in AS. Gene expression profiles of AS and non-AS samples were curated from the GEO project. Differential expression analysis was adopted for screening AS-specific aging-related genes. LASSO regression analysis was presented for constructing a diagnostic model, and the discriminatory capacity was evaluated with ROC curves. Through consensus clustering analysis, aging-based molecular subtypes were conducted. Immune levels were estimated based on the expression of HLAs, immune checkpoints, and immune cell infiltrations. Key genes were then identified via WGCNA. The effects of CEBPB knockdown on macrophage polarization were examined with western blotting and ELISA. Furthermore, macrophages were exposed to 100 mg/L ox-LDL for 48 h to induce macrophage foam cells. After silencing CEBPB, markers of cholesterol uptake, esterification and hydrolysis, and efflux were detected with western blotting. This study identified 28 AS-specific aging-related genes. The aging-related gene signature was developed, which could accurately diagnose AS in both the GSE20129 (AUC = 0.898) and GSE43292 (AUC = 0.685) datasets. Based on the expression profiling of AS-specific aging-related genes, two molecular subtypes were clustered, and with diverse immune infiltration features. The molecular subtype-relevant genes were obtained with WGCNA, which were markedly associated with immune activation. Silencing CEBPB triggered anti-inflammatory M2-like polarization and suppressed foam cell formation. Our findings suggest the critical implications of aging-related genes in diagnosing AS and modulating immune infiltrations.
年龄增长是动脉粥样硬化(AS)的主要危险因素。然而,这一现象背后的机制仍不明确。在此,本研究对AS中与衰老相关基因的生物学意义进行了全面分析。从基因表达综合数据库(GEO)项目中整理了AS和非AS样本的基因表达谱。采用差异表达分析筛选AS特异性衰老相关基因。进行套索回归分析以构建诊断模型,并用ROC曲线评估其判别能力。通过一致性聚类分析,划分基于衰老的分子亚型。根据人类白细胞抗原(HLAs)、免疫检查点的表达以及免疫细胞浸润情况评估免疫水平。然后通过加权基因共表达网络分析(WGCNA)确定关键基因。用蛋白质免疫印迹法和酶联免疫吸附测定法检测CEBPB基因敲低对巨噬细胞极化的影响。此外,将巨噬细胞暴露于100mg/L氧化低密度脂蛋白(ox-LDL)中48小时以诱导巨噬细胞泡沫化。沉默CEBPB后,用蛋白质免疫印迹法检测胆固醇摄取、酯化、水解和流出的标志物。本研究鉴定出28个AS特异性衰老相关基因。建立了衰老相关基因特征,其在GSE20129(曲线下面积[AUC]=0.898)和GSE43292(AUC=0.685)数据集中均能准确诊断AS。基于AS特异性衰老相关基因的表达谱,聚类出两种分子亚型,且具有不同的免疫浸润特征。通过WGCNA获得了与分子亚型相关的基因,这些基因与免疫激活显著相关。沉默CEBPB可引发抗炎性M2样极化并抑制泡沫细胞形成。我们的研究结果表明,衰老相关基因在诊断AS和调节免疫浸润方面具有关键意义。