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内生菌衍生化合物对胆碱酯酶、β-分泌酶1(BACE1)和单胺氧化酶(MAO)抑制活性的计算研究:迈向新型神经治疗药物的发现

Computational studies on the cholinesterase, beta-secretase 1 (BACE1) and monoamine oxidase (MAO) inhibitory activities of endophytes-derived compounds: towards discovery of novel neurotherapeutics.

作者信息

Falade Ayodeji Osmund, Adewole Kayode Ezekiel, Ishola Ahmed Adebayo, Gyebi Gideon Ampoma, Olajide Nurudeen Rasaq

机构信息

Biotechnology, Computational Biochemistry and Phytomedicine Research Group, Department of Biochemistry, Faculty of Basic Medical Sciences, University of Medical Sciences, Ondo City, Ondo State, Nigeria.

Central Research Laboratories Limited, Ilorin, Kwara State, Nigeria.

出版信息

J Biomol Struct Dyn. 2023 Apr;41(6):2540-2554. doi: 10.1080/07391102.2022.2035255. Epub 2022 Feb 4.

Abstract

Cholinesterases, beta-secretase 1 (BACE1) and monoamine oxidase (MAO) are significant in the etiology of neurodegenerative diseases. Inhibition of these enzymes is therefore a major strategy for the development of neurotherapeutics. Even though, this strategy has birthed some approved synthetic drugs, they are characterized by adverse effects. It is therefore, imperative to explore promising alternatives. Consequently, we assessed the inhibitory activities of some endophytes-derived compounds against selected targets towards discovery of novel neurotherapeutics. Standard inhibitors and 83 endophytes-derived compounds were docked against acetylcholinesterase (AChE), butyrylcholinesterase (BChE), BACE 1 and MAO using AutodockVina while the molecular interactions between the selected targets and the compounds with notable binding affinity were viewed through Discovery Studio Visualizer. Druglikeness and Absorption-Distribution-Metabolism-Excretion-Toxicity (ADMET) and blood brain barrier (BBB) properties of the top 4 compounds were evaluated using the Swiss online ADME web tool and OSIRIS server; ligands-enzymes complex stability was assessed through molecular dynamics (MD) simulation. From the 83 compounds, asperflavin, ascomfurans C, camptothecine and corynesidone A exhibited remarkable inhibitory activity against all the four target enzymes compared to the respective standard inhibitors. However, only corynesidone A could transverse the BBB and predicted to be safe. MD simulation of the unbound and complexed enzymes with corynesidone A showed that the complexes were stable throughout the simulation time. Given the exceptional inhibitory activity of endophytes-derived corynesidone A against the four selected targets, its ability to permeate the BBB, excellent drugability properties as well as its stability when complexed with the enzymes, it is a good candidate for further studies towards development of new neurotherapeutics.Communicated by Ramaswamy H. Sarma.

摘要

胆碱酯酶、β-分泌酶1(BACE1)和单胺氧化酶(MAO)在神经退行性疾病的病因学中具有重要意义。因此,抑制这些酶是神经治疗药物开发的主要策略。尽管这一策略已经催生了一些获批的合成药物,但它们都有不良反应。因此,探索有前景的替代方案势在必行。为此,我们评估了一些内生菌衍生化合物对选定靶点的抑制活性,以发现新型神经治疗药物。使用AutodockVina将标准抑制剂和83种内生菌衍生化合物与乙酰胆碱酯酶(AChE)、丁酰胆碱酯酶(BChE)、BACE 1和MAO进行对接,同时通过Discovery Studio Visualizer观察选定靶点与具有显著结合亲和力的化合物之间的分子相互作用。使用瑞士在线ADME网络工具和OSIRIS服务器评估排名前4的化合物的类药性和吸收-分布-代谢-排泄-毒性(ADMET)以及血脑屏障(BBB)特性;通过分子动力学(MD)模拟评估配体-酶复合物的稳定性。在这83种化合物中,与各自的标准抑制剂相比,曲霉黄素、曲霉呋喃C、喜树碱和棒曲霉素A对所有四种靶酶均表现出显著的抑制活性。然而,只有棒曲霉素A能够穿过血脑屏障,并且预测是安全的。棒曲霉素A与未结合和复合酶的MD模拟表明,复合物在整个模拟时间内都是稳定的。鉴于内生菌衍生的棒曲霉素A对四个选定靶点具有出色的抑制活性,其渗透血脑屏障的能力、优异的成药特性以及与酶复合时的稳定性,它是进一步研究开发新型神经治疗药物的良好候选物。由Ramaswamy H. Sarma传达。

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