Suppr超能文献

用G1(一种G蛋白偶联雌激素受体(GPER)激动剂)处理的MCF-7乳腺癌细胞的转录组数据。

Transcriptomic data of MCF-7 breast cancer cells treated with G1, a G-protein coupled estrogen receptor (GPER) agonist.

作者信息

Pal Uttariya, Sahu Ankur, Barah Pankaj, Limaye Anil Mukund

机构信息

Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati - 781039, Assam, India.

Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur 784028, Assam, India.

出版信息

Data Brief. 2022 Feb 13;41:107948. doi: 10.1016/j.dib.2022.107948. eCollection 2022 Apr.

Abstract

Besides short-term non-genomic effects, the G-protein coupled estrogen receptor (GPER) also mediates long-term genomic effects of estrogen. The genomic effects of GPER activation are not completely understood. G1 is a selective GPER agonist, which is popularly used for addressing the effects of GPER activation. Here, we present transcriptomic (RNA-seq) data on MCF-7 cells treated with 100 nM, or 1 µM G1 for a period of 48 h. The data are available from GEO (accession number GSE188706).

摘要

除了短期非基因组效应外,G蛋白偶联雌激素受体(GPER)还介导雌激素的长期基因组效应。GPER激活的基因组效应尚未完全明确。G1是一种选择性GPER激动剂,常用于研究GPER激活的效应。在此,我们展示了用100 nM或1 µM G1处理MCF-7细胞48小时后的转录组(RNA测序)数据。这些数据可从基因表达综合数据库(GEO)获取(登录号GSE188706)。

相似文献

1
Transcriptomic data of MCF-7 breast cancer cells treated with G1, a G-protein coupled estrogen receptor (GPER) agonist.
Data Brief. 2022 Feb 13;41:107948. doi: 10.1016/j.dib.2022.107948. eCollection 2022 Apr.
4
Estrogen-mediated inactivation of FOXO3a by the G protein-coupled estrogen receptor GPER.
BMC Cancer. 2015 Oct 15;15:702. doi: 10.1186/s12885-015-1699-6.
5
ER-mediated anti-tumor effects of shikonin on breast cancer.
Eur J Pharmacol. 2019 Nov 15;863:172667. doi: 10.1016/j.ejphar.2019.172667. Epub 2019 Sep 20.
6
GPER mediates decreased chemosensitivity via regulation of ABCG2 expression and localization in tamoxifen-resistant breast cancer cells.
Mol Cell Endocrinol. 2020 Apr 15;506:110762. doi: 10.1016/j.mce.2020.110762. Epub 2020 Feb 19.
8
DNA methylation in the upstream CpG island of the GPER locus and its relationship with GPER expression in colon cancer cell lines.
Mol Biol Rep. 2020 Oct;47(10):7547-7555. doi: 10.1007/s11033-020-05817-5. Epub 2020 Sep 16.

引用本文的文献

1
Pathological and Molecular Characterization of Grass Carp Co-Infected with Two Species.
Animals (Basel). 2025 Jan 18;15(2):263. doi: 10.3390/ani15020263.
2
Transcriptomic data of BT549 triple negative breast cancer cells treated with 20 µM NU7441, a DNA-dependent kinase inhibitor.
Data Brief. 2024 Feb 13;53:110183. doi: 10.1016/j.dib.2024.110183. eCollection 2024 Apr.

本文引用的文献

1
fastp: an ultra-fast all-in-one FASTQ preprocessor.
Bioinformatics. 2018 Sep 1;34(17):i884-i890. doi: 10.1093/bioinformatics/bty560.
2
HISAT: a fast spliced aligner with low memory requirements.
Nat Methods. 2015 Apr;12(4):357-60. doi: 10.1038/nmeth.3317. Epub 2015 Mar 9.
3
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features.
Bioinformatics. 2014 Apr 1;30(7):923-30. doi: 10.1093/bioinformatics/btt656. Epub 2013 Nov 13.
4
The Sequence Alignment/Map format and SAMtools.
Bioinformatics. 2009 Aug 15;25(16):2078-9. doi: 10.1093/bioinformatics/btp352. Epub 2009 Jun 8.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验