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体外重建 BRCA1-BARD1/RAD51 介导的同源 DNA 配对。

In Vitro Reconstitution of BRCA1-BARD1/RAD51-Mediated Homologous DNA Pairing.

机构信息

Department of Biochemistry and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.

出版信息

Methods Mol Biol. 2022;2444:207-225. doi: 10.1007/978-1-0716-2063-2_13.

Abstract

RAD51-mediated homologous recombination (HR) is a conserved mechanism for the repair of DNA double-strand breaks and the maintenance of DNA replication forks. Several breast and ovarian tumor suppressors, including BRCA1 and BARD1, have been implicated in HR since their discovery in the 1990s. However, a holistic understanding of how they participate in HR has been hampered by the immense challenge of expressing and purifying these large and unstable protein complexes for mechanistic analysis. Recently, we have overcome such a challenge for the BRCA1-BARD1 complex, allowing us to demonstrate its pivotal role in HR via the promotion of RAD51-mediated DNA strand invasion. In this chapter, we describe detailed procedures for the expression and purification of the BRCA1-BARD1 complex and in vitro assays using this tumor suppressor complex to examine its ability to promote RAD51-mediated homologous DNA pairing. This includes two distinct biochemical assays, namely, D-loop formation and synaptic complex assembly. These methods are invaluable for studying the BRCA1-BARD1 complex and its functional interplay with other factors in the HR process.

摘要

RAD51 介导的同源重组 (HR) 是修复 DNA 双链断裂和维持 DNA 复制叉的一种保守机制。自 20 世纪 90 年代发现以来,几种乳腺癌和卵巢肿瘤抑制因子,包括 BRCA1 和 BARD1,已被认为与 HR 有关。然而,由于表达和纯化这些大型和不稳定的蛋白质复合物进行机制分析的巨大挑战,对它们如何参与 HR 的全面理解一直受到阻碍。最近,我们已经克服了 BRCA1-BARD1 复合物的这一挑战,使我们能够通过促进 RAD51 介导的 DNA 链入侵来证明其在 HR 中的关键作用。在本章中,我们描述了表达和纯化 BRCA1-BARD1 复合物的详细程序,以及使用这种肿瘤抑制复合物进行的体外测定,以检查其促进 RAD51 介导的同源 DNA 配对的能力。这包括两种不同的生化测定,即 D 环形成和突触复合物组装。这些方法对于研究 BRCA1-BARD1 复合物及其与 HR 过程中其他因素的功能相互作用非常有价值。

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