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ACAN 双等位基因突变致严重特发性身材矮小女孩。

ACAN biallelic variants in a girl with severe idiopathic short stature.

机构信息

Department of Pediatrics, Hamamatsu University School of Medicine, Hamamatsu, Japan.

Department of Pediatrics, Shizuoka Saiseikai General Hospital, Shizuoka, Japan.

出版信息

J Hum Genet. 2022 Aug;67(8):481-486. doi: 10.1038/s10038-022-01030-3. Epub 2022 Mar 22.

DOI:10.1038/s10038-022-01030-3
PMID:35314765
Abstract

Although ACAN heterozygous loss-of-function variants often cause idiopathic short stature (ISS) phenotype, there is no report describing ISS phenotype caused by ACAN biallelic loss-of-function variants. We encountered a 4 1/12-year-old Japanese girl with a height of 80.4 cm (-5.2 SD), a weight of 11.4 kg (-1.9 SD), a head circumference of 48.7 cm (-0.6 SD), and an arm span/height ratio of 1.0 (+1.1 SD). Endocrine studies and bone survey showed no abnormal findings. Whole exome sequencing revealed biallelic rare variants in ACAN, i.e., NM_013227.4:c.4214delC:p.(Pro1405Leufs*3) derived from her father and paternal grandfather with short stature (-2.9 and -2.0 SD, respectively) and NM_013227.4:c.7124 A>G:p.(Gln2375Arg) inherited from her mother and maternal grandmother with short stature (-2.1 and -3.0 SD, respectively). The frameshift variant underwent nonsense mediated mRNA decay, and the missense variant was assessed to have high pathogenicity. The results imply for the first time that ACAN biallelic loss-of-function variants can cause severe ISS phenotype.

摘要

虽然 ACAN 杂合功能丧失变异通常导致特发性身材矮小症(ISS)表型,但尚无报道描述 ACAN 双等位基因功能丧失变异引起的 ISS 表型。我们遇到了一位 4 岁 10 个月的日本女孩,身高 80.4cm(-5.2SD),体重 11.4kg(-1.9SD),头围 48.7cm(-0.6SD),臂展/身高比为 1.0(+1.1SD)。内分泌研究和骨骼检查未发现异常。全外显子组测序显示 ACAN 存在双等位基因罕见变异,即 NM_013227.4:c.4214delC:p.(Pro1405Leufs*3)来自身材矮小的父亲和祖父(分别为-2.9 和-2.0SD),以及 NM_013227.4:c.7124A>G:p.(Gln2375Arg)来自身材矮小的母亲和外祖母(分别为-2.1 和-3.0SD)。移码变异经历了无意义介导的 mRNA 衰变,错义变异被评估为具有高度致病性。结果首次表明,ACAN 双等位基因功能丧失变异可导致严重的 ISS 表型。

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本文引用的文献

1
Whole-Exome Sequencing in Idiopathic Short Stature: Rare Mutations Affecting Growth.特发性身材矮小的全外显子组测序:影响生长的罕见突变
J Pediatr Genet. 2020 Sep 18;10(4):284-291. doi: 10.1055/s-0040-1716400. eCollection 2021 Dec.
2
Arm Span and Its Relation to Height in a 2- to 17-Year-Old Reference Population and Heterozygous Carriers of ACAN Variants.双臂展长与身高在 2 至 17 岁参考人群及 ACAN 变异杂合子携带者中的关系。
Horm Res Paediatr. 2020;93(3):164-172. doi: 10.1159/000508500. Epub 2020 Jun 23.
3
Identification of de novo CSNK2A1 and CSNK2B variants in cases of global developmental delay with seizures.
伴有癫痫发作的全面发育迟缓病例中从头CSNK2A1和CSNK2B变异体的鉴定。
J Hum Genet. 2019 Apr;64(4):313-322. doi: 10.1038/s10038-018-0559-z. Epub 2019 Jan 17.
4
The second report on spondyloepimetaphyseal dysplasia, aggrecan type: a milder phenotype than originally reported.关于聚集蛋白聚糖型脊椎骨骺发育不良的第二篇报告:一种比最初报道更轻的表型。
Clin Dysmorphol. 2019 Jan;28(1):26-29. doi: 10.1097/MCD.0000000000000241.
5
Genetic screening confirms heterozygous mutations in ACAN as a major cause of idiopathic short stature.基因筛查证实 ACAN 中的杂合突变是特发性身材矮小的主要原因。
Sci Rep. 2017 Sep 22;7(1):12225. doi: 10.1038/s41598-017-12465-6.
6
Clinical Characterization of Patients With Autosomal Dominant Short Stature due to Aggrecan Mutations.因聚集蛋白聚糖突变导致常染色体显性矮小症患者的临床特征
J Clin Endocrinol Metab. 2017 Feb 1;102(2):460-469. doi: 10.1210/jc.2016-3313.
7
The aggrecanopathies; an evolving phenotypic spectrum of human genetic skeletal diseases.聚集蛋白聚糖病;人类遗传性骨骼疾病不断演变的表型谱。
Orphanet J Rare Dis. 2016 Jun 28;11(1):86. doi: 10.1186/s13023-016-0459-2.
8
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.序列变异解读的标准与指南:美国医学遗传学与基因组学学会和分子病理学协会的联合共识推荐
Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.
9
Short stature, accelerated bone maturation, and early growth cessation due to heterozygous aggrecan mutations.由于杂合性聚集蛋白聚糖突变导致身材矮小、骨骼成熟加速和早期生长停止。
J Clin Endocrinol Metab. 2014 Aug;99(8):E1510-8. doi: 10.1210/jc.2014-1332. Epub 2014 Apr 24.
10
A recessive skeletal dysplasia, SEMD aggrecan type, results from a missense mutation affecting the C-type lectin domain of aggrecan.一种隐性骨骼发育不良,即聚集蛋白聚糖型SEMD,是由一个影响聚集蛋白聚糖C型凝集素结构域的错义突变引起的。
Am J Hum Genet. 2009 Jan;84(1):72-9. doi: 10.1016/j.ajhg.2008.12.001. Epub 2008 Dec 24.