Liu Hong-Li, Gao Feng-Guan, Wang Dan-Dan, Hu Fang-Yuan, Xu Ping, Chang Qing, Xu Ge-Zhi, Wu Ji-Hong
Eye Institute, Eye and ENT Hospital, College of Medicine, Fudan University, Shanghai, China.
State Key Laboratory of Medical Neurobiology, Institutes of Brain Science and Collaborative Innovation Center for Brain Science, Shanghai Medical College, Fudan University, Shanghai, China.
Front Genet. 2022 Mar 31;13:850122. doi: 10.3389/fgene.2022.850122. eCollection 2022.
The purpose of this study was to investigate the clinical and genetic characteristics of the retinitis pigmentosa GTPase regulatory factor gene () in a Chinese cohort. A retrospective analysis was performed on 80 subjects with -retinal dystrophy (-RD) for detailed genetic and clinical characterization. The panel-based next-generation sequencing of 792 causative genes involved in common genetic eye diseases was conducted in all individuals, followed by clinical variant interpretation. Information, including age, sex, geographic distribution, family history, consanguineous marriage, age at symptom onset, disease duration, best corrected visual acuity (BCVA), and complete ophthalmologic examination results, was collected. This cohort (41 men and 39 women) included 26 families (26 probands and their available family members) and 13 sporadic cases. The average age of these participants was 36.35 ± 17.68 years, and the majority of the families were from eastern China (28 families, 71.79%). The average duration of disease in the probands was 22.68 ± 15.80 years. In addition, the average BCVA values of the right and left eyes in the probands were 0.96 ± 0.77 and 1.00 ± 0.77, respectively. A total of 34 variants were identified, including 6 reported variants and 28 novel variants. Among these variants, NM_001034853.1: c.2899_2902delGAAG and c.2744_2745ins24 were considered variants. The majority of the variants were classified as likely pathogenic, accounting for 70.59% of the variants (24 variants). The most common nucleotide and amino acid changes identified in this study were deletions (16 variants, 45.06%) and frameshifts (17 variants, 50.00%), respectively. Genetic analysis revealed that these variants were distributed in 10 different subregions of and 70.59% of the variants (24 variants) were located in exon 15. Four variants, NM_001034853.1: c.2405_2406delAG, c.1345C > T, c.2218G > T and c.2236_2237delGA, occurred at a very high frequency of 28.21% (11 families) among 39 unrelated families. This study expands the known mutational spectrum of , and we provide a new reference for the genetic diagnosis of variants.
本研究旨在调查中国队列中视网膜色素变性GTP酶调节因子基因()的临床和遗传特征。对80例患有视网膜营养不良(-RD)的受试者进行了回顾性分析,以进行详细的遗传和临床特征描述。对所有个体进行了基于基因panel的792个常见遗传性眼病致病基因的二代测序,随后进行临床变异解读。收集了包括年龄、性别、地理分布、家族史、近亲结婚、症状出现年龄、病程、最佳矫正视力(BCVA)以及完整眼科检查结果等信息。该队列(41名男性和39名女性)包括26个家系(26名先证者及其可获得的家庭成员)和13例散发病例。这些参与者的平均年龄为36.35±17.68岁,大多数家系来自中国东部(28个家系,71.79%)。先证者的平均病程为22.68±15.80年。此外,先证者右眼和左眼的平均BCVA值分别为0.96±0.77和1.00±0.77。共鉴定出34个变异,包括6个已报道的变异和28个新变异。在这些变异中,NM_001034853.1: c.2899_2902delGAAG和c.2744_2745ins24被认为是变异。大多数变异被分类为可能致病,占变异的70.59%(24个变异)。本研究中鉴定出的最常见核苷酸和氨基酸变化分别是缺失(16个变异,45.06%)和移码(17个变异,50.00%)。遗传分析显示,这些变异分布在的10个不同亚区域,70.59%的变异(24个变异)位于第15外显子。四个变异,NM_001034853.1: c.2405_2406delAG、c.1345C>T、c.2218G>T和c.2236_2237delGA在39个无关家系中的发生频率非常高,为28.21%(11个家系)。本研究扩展了已知的突变谱,为变异的遗传诊断提供了新的参考。