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在纯1,1,1,2-四氟乙烷溶剂中进行多肽的化学酶法合成。

Chemoenzymatic synthesis of polypeptides in neat 1,1,1,2-tetrafluoroethane solvent.

作者信息

Aguirre-Díaz Isabel S, Montiel Carmina, Bustos-Jaimes Ismael, Medina-Gonzalez Yaocihuatl, Tecante Alberto, Gimeno Miquel

机构信息

Facultad de Química, Depto. de Alimentos y Biotecnología, Universidad Nacional Autónoma de México (UNAM) CDMX Mexico

Facultad de Medicina, Depto. de Bioquímica, Universidad Nacional Autónoma de México (UNAM) CDMX Mexico.

出版信息

RSC Adv. 2018 Oct 22;8(63):35936-35945. doi: 10.1039/c8ra06657d.

DOI:10.1039/c8ra06657d
PMID:35558459
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9088702/
Abstract

Chemoenzymatic polypeptide synthesis offers several advantages over chemical or other biological routes, however, the use of aqueous-based media suffers from reverse hydrolysis reactions that challenge peptide chain propagation. Herein, the protease from subtilisin Carlsberg biocatalyzed the synthesis of poly-l-PheOEt, poly-l-LeuOEt, and the copolymers poly-l-PheOEt--l-LeuOEt from their amino acid ethyl ester substrates in a neat liquid 1,1,1,2-tetrafluoroethane solvent. The products, achieved in acceptable yields ( 50%), were fully characterized showing relatively high molar mass ( 20 000 Da for poly-l-PheOEt). This non-toxic low-boiling hydrofluorocarbon enhances enzymatic peptide propagation by limiting hydrolysis owing to its hydrophobic and relatively polar characteristics that sustain the protease activity and solubilize substrates and products. Computational molecular dynamic calculations were used to assess the l-PheOEt/l-LeuOEt-solvent and polypeptide-solvent interactions in this system. Additionally, the homopolypeptides displayed higher crystallinity than the copolypeptides with random incorporation of amino acid ethyl esters, notwithstanding the significantly highest specificity for Phe in this system. Interestingly, secondary structure characterization of the products by FTIR and circular dichroism suggests a non-common peptide folding.

摘要

与化学或其他生物合成途径相比,化学酶法多肽合成具有若干优势,然而,使用水基介质会遭遇逆水解反应,这对肽链延伸构成挑战。在此,来自枯草芽孢杆菌Carlsberg的蛋白酶在纯液态1,1,1,2 - 四氟乙烷溶剂中,以氨基酸乙酯底物生物催化合成了聚 - l - 苯丙氨酸乙酯、聚 - l - 亮氨酸乙酯以及共聚物聚 - l - 苯丙氨酸乙酯 - l - 亮氨酸乙酯。产物以可接受的产率(50%)获得,经过全面表征,显示出相对较高的摩尔质量(聚 - l - 苯丙氨酸乙酯为20000 Da)。这种无毒的低沸点氢氟烃因其疏水且相对极性的特性维持蛋白酶活性并使底物和产物溶解,通过限制水解增强了酶促肽链延伸。利用计算分子动力学计算评估了该体系中l - 苯丙氨酸乙酯/l - 亮氨酸乙酯 - 溶剂以及多肽 - 溶剂的相互作用。此外,尽管该体系中对苯丙氨酸具有显著最高的特异性,但与随机掺入氨基酸乙酯的共聚物相比,均聚物显示出更高的结晶度。有趣的是,通过傅里叶变换红外光谱(FTIR)和圆二色性对产物进行的二级结构表征表明存在一种不常见的肽折叠。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/e5d3a1b4039f/c8ra06657d-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/37a7924a7c79/c8ra06657d-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/37a91348022a/c8ra06657d-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/016f143e1a56/c8ra06657d-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/c36bdc42942d/c8ra06657d-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/8d248bea07bc/c8ra06657d-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/889af5ea8b69/c8ra06657d-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/529194d7bb66/c8ra06657d-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/e5d3a1b4039f/c8ra06657d-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/37a7924a7c79/c8ra06657d-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/37a91348022a/c8ra06657d-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/016f143e1a56/c8ra06657d-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/c36bdc42942d/c8ra06657d-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/8d248bea07bc/c8ra06657d-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/889af5ea8b69/c8ra06657d-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/529194d7bb66/c8ra06657d-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6798/9088702/e5d3a1b4039f/c8ra06657d-f8.jpg

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