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Ash2l SDI 结构域对于维持 DPY30 的稳定性和结合能力是必需的。

The Ash2l SDI Domain Is Required to Maintain the Stability and Binding of DPY30.

机构信息

The State Key Laboratory of Medical Molecular Biology, Neuroscience Center, Medical Primate Research Center and Department of Molecular Biology and Biochemistry, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China.

Chinese Institute for Brain Research, Beijing 102206, China.

出版信息

Cells. 2022 Apr 25;11(9):1450. doi: 10.3390/cells11091450.

DOI:10.3390/cells11091450
PMID:35563756
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9103646/
Abstract

ASH2L and DPY30 are important for the assembly and catalytic activity of the complex associated with SET1 (COMPASS), which catalyzes histone methylation and regulates gene expression. However, the regulations among COMPASS components are not fully understood. Here, we leveraged a mouse model and cell lines to observe the outcome of Ash2l depletion and found a significant decrease in DPY30. Analyzing ASH2L ChIP-seq and RNA-seq data excluded transcriptional and translational regulation of ASH2L to DPY30. The decrease in DPY30 was further attributed to the degradation via the ubiquitin-mediated proteasomal pathway. We also verified that three amino acids in the ASH2L Sdc1 DPY30 interaction (SDI) domain are essential for the recognition and binding of DPY30. Lastly, we unexpectedly observed that overexpression of DPY30 in Ash2l-depleted cells rescued the decrease in Ccnd1 and the abnormal cell cycle, which indicates that DPY30 can participate in other complexes to regulate gene expression. Overall, our results, for the first time, reveal that the existence of DPY30 relies on the binding with ASH2L, with degradation of DPY30 via the ubiquitin-proteasome system, and they further indicate that the function of DPY30 can be independent of ASH2L.

摘要

ASH2L 和 DPY30 对于与 SET1(COMPASS)相关的复合物的组装和催化活性很重要,该复合物催化组蛋白甲基化并调节基因表达。然而,COMPASS 成分之间的调控机制尚不完全清楚。在这里,我们利用小鼠模型和细胞系观察到 Ash2l 耗竭的结果,并发现 DPY30 显著减少。分析 ASH2L ChIP-seq 和 RNA-seq 数据排除了 ASH2L 对 DPY30 的转录和翻译调控。DPY30 的减少进一步归因于通过泛素介导的蛋白酶体途径进行降解。我们还验证了 ASH2L Sdc1 DPY30 相互作用(SDI)结构域中的三个氨基酸对于 DPY30 的识别和结合是必需的。最后,我们意外地观察到在 Ash2l 耗竭细胞中过表达 DPY30 可以挽救 Ccnd1 的减少和异常的细胞周期,这表明 DPY30 可以参与其他复合物来调节基因表达。总的来说,我们的结果首次揭示了 DPY30 的存在依赖于与 ASH2L 的结合,通过泛素-蛋白酶体系统降解 DPY30,并且进一步表明 DPY30 的功能可以独立于 ASH2L。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/9fae08995235/cells-11-01450-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/13d828b530c3/cells-11-01450-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/2974ae98744c/cells-11-01450-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/017676adced2/cells-11-01450-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/82064dcd1533/cells-11-01450-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/9fae08995235/cells-11-01450-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/13d828b530c3/cells-11-01450-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/2974ae98744c/cells-11-01450-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/017676adced2/cells-11-01450-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/82064dcd1533/cells-11-01450-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f81a/9103646/9fae08995235/cells-11-01450-g005.jpg

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本文引用的文献

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Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.DPY30 和 ASH2L 无规卷曲区域调节染色质上的 MLL/SET1 活性的机制。
Nat Commun. 2021 May 19;12(1):2953. doi: 10.1038/s41467-021-23268-9.
2
An H3K4me3 reader, BAP18 as an adaptor of COMPASS-like core subunits co-activates ERα action and associates with the sensitivity of antiestrogen in breast cancer.一种 H3K4me3 阅读器,BAP18 作为 COMPASS 样核心亚基的接头,共同激活 ERα 作用,并与乳腺癌中抗雌激素的敏感性相关。
Nucleic Acids Res. 2020 Nov 4;48(19):10768-10784. doi: 10.1093/nar/gkaa787.
3
The complex activities of the SET1/MLL complex core subunits in development and disease.
SET1/MLL 复合物核心亚基在发育和疾病中的复杂活动。
Biochim Biophys Acta Gene Regul Mech. 2020 Jul;1863(7):194560. doi: 10.1016/j.bbagrm.2020.194560. Epub 2020 Apr 15.
4
BAP18 is involved in upregulation of CCND1/2 transcription to promote cell growth in oral squamous cell carcinoma.BAP18 通过上调 CCND1/2 转录促进口腔鳞状细胞癌的细胞生长。
EBioMedicine. 2020 Mar;53:102685. doi: 10.1016/j.ebiom.2020.102685. Epub 2020 Feb 27.
5
KMT2C/D COMPASS complex-associated diseases [KCOM-ADs]: an emerging class of congenital regulopathies.KMT2C/D COMPASS复合物相关疾病[KCOM-ADs]:一类新兴的先天性调节异常疾病。
Clin Epigenetics. 2020 Jan 10;12(1):10. doi: 10.1186/s13148-019-0802-2.
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Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.冷冻电镜结构解析出人源 MLL1 核心复合物与核小体的复合物。
Nat Commun. 2019 Dec 5;10(1):5540. doi: 10.1038/s41467-019-13550-2.
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TrxG Complex Catalytic and Non-catalytic Activity Play Distinct Roles in Pancreas Progenitor Specification and Differentiation.TrxG 复合物的催化和非催化活性在胰腺祖细胞的特化和分化中发挥不同的作用。
Cell Rep. 2019 Aug 13;28(7):1830-1844.e6. doi: 10.1016/j.celrep.2019.07.035.
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Cell Rep. 2019 Jul 16;28(3):698-711.e5. doi: 10.1016/j.celrep.2019.06.055.
9
Specific inhibition of DPY30 activity by ASH2L-derived peptides suppresses blood cancer cell growth.ASH2L 衍生肽特异性抑制 DPY30 活性可抑制血癌细胞生长。
Exp Cell Res. 2019 Sep 15;382(2):111485. doi: 10.1016/j.yexcr.2019.06.030. Epub 2019 Jun 26.
10
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