Fang Chaoyou, Xu Houshi, Liu Yibo, Huang Chenkai, Wang Xiaoyu, Zhang Zeyu, Xu Yuanzhi, Yuan Ling, Zhang Anke, Shao Anwen, Lou Meiqing
Department of Neurosurgery, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200080, China.
Department of Neurosurgery, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310009, China.
Brain Sci. 2022 May 19;12(5):662. doi: 10.3390/brainsci12050662.
(1) Background: glioma is the most prevalent primary tumor of the human central nervous system and accompanies extremely poor prognosis in patients. The transient receptor potential (TRP) channels family consists of six different families, which are closely associated with cancer cell proliferation, differentiation, migration, and invasion. TRP family genes play an essential role in the development of tumors. Nevertheless, the function of these genes in gliomas is not fully understood. (2) Methods: we analyze the gene expression data of 28 TRP family genes in glioma patients through bioinformatic analysis. (3) Results: the study showed the aberrations of TRP family genes were correlated to prognosis in glioma. Then, we set enrichment analysis and selected 10 hub genes that may play an important role in glioma. Meanwhile, the expression of 10 hub genes was further established according to different grades, survival time, IDH mutation status, and 1p/19q codeletion status. We found that TRPC1, TRPC3, TRPC4, TRPC5, TRPC6, MCOLN1, MCOLN2, and MCOLN3 were significantly correlated to the prognosis in glioma patients. Furthermore, we illustrated that the expression of hub genes was associated with immune activation and immunoregulators (immunoinhibitors, immunostimulators, and MHC molecules) in glioma. (4) Conclusions: we proved that TRP family genes are promising immunotherapeutic targets and potential clinical biomarkers in patients with glioma.
(1) 背景:胶质瘤是人类中枢神经系统最常见的原发性肿瘤,患者预后极差。瞬时受体电位(TRP)通道家族由六个不同的家族组成,与癌细胞的增殖、分化、迁移和侵袭密切相关。TRP家族基因在肿瘤发生发展中起重要作用。然而,这些基因在胶质瘤中的功能尚未完全明确。(2) 方法:我们通过生物信息学分析,分析了胶质瘤患者中28个TRP家族基因的基因表达数据。(3) 结果:研究表明,TRP家族基因的异常与胶质瘤的预后相关。然后,我们进行富集分析并筛选出10个可能在胶质瘤中起重要作用的枢纽基因。同时,根据不同分级、生存时间、异柠檬酸脱氢酶(IDH)突变状态和1p/19q共缺失状态,进一步确定了10个枢纽基因的表达情况。我们发现,TRPC1、TRPC3、TRPC4、TRPC5、TRPC6、MCOLN1、MCOLN2和MCOLN3与胶质瘤患者的预后显著相关。此外,我们还阐明了枢纽基因的表达与胶质瘤中的免疫激活及免疫调节因子(免疫抑制剂、免疫刺激剂和主要组织相容性复合体分子)相关。(4) 结论:我们证明了TRP家族基因是胶质瘤患者有前景的免疫治疗靶点和潜在的临床生物标志物。