School of Biotechnology, Gangadhar Meher University, Sambalpur, India.
CSIR- Institute of Microbial Technology, Chandigarh, India.
Food Microbiol. 2022 Sep;106:104039. doi: 10.1016/j.fm.2022.104039. Epub 2022 Apr 14.
Genus Leuconostoc consists of a diverse range of lactic acid bacteria (LAB) from dairy, food and environmental ecology. Even though the species of Leuconostoc are commercially significant, their taxonomy is largely based on old, low-resolution classical methods. Several taxonomic reclassifications in the past were inadequate for microbiologist and food industry professionals to demarcate any new strain of genus Leuconostoc. The current taxonomy of the genus is largely based on classical approaches, which are in utmost need of reinvestigation by whole genome-based approaches. In the present study, the taxono-phylogenomic analysis depicted sixteen species, including three novel genomospecies and several reshufflings across the species, namely, L. mesenteroides, L. pseudomesenteroides, L. gelidum and L. lactis. Genus-wide T3PKS, CAZymes, and vector plasmids supports its biotechnological potential. However, detection of the antibiotic resistance genes in such an important LAB genus raises concern over their utility in industry. Present, large-scale in-depth genome-based study can shed light on the genome dynamics of the member species, help to obtain a more robust taxonomy and elucidate its biotechnology importance.
肠球菌属是一类来源于乳制品、食品和环境生态的具有多样性的乳酸菌。尽管肠球菌属的许多种具有商业重要性,但其分类主要基于旧的、低分辨率的经典方法。过去的几次分类重排对于微生物学家和食品工业专业人员来说,不足以区分任何新的肠球菌属菌株。目前该属的分类主要基于经典方法,这些方法最需要通过全基因组方法进行重新研究。在本研究中,通过 taxono-phylogenomic 分析描绘了 16 个种,包括 3 个新的基因组种和几个种间的重新排列,即肠系膜明串珠菌、伪膜明串珠菌、嗜冷明串珠菌和乳酸乳球菌。属水平的 T3PKS、CAZymes 和载体质粒支持其生物技术潜力。然而,在如此重要的乳酸菌属中检测到抗生素抗性基因,引起了人们对其在工业中应用的关注。目前,大规模的深入的基于基因组的研究可以揭示成员种的基因组动态,有助于获得更稳健的分类,并阐明其生物技术的重要性。