MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China.
Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, 51000, China.
Transgenic Res. 2022 Oct;31(4-5):445-455. doi: 10.1007/s11248-022-00313-x. Epub 2022 Jun 15.
Base editors (BEs) are efficient and precise tools for generating single base conversions in living organisms. While most BE systems are limited in mediating C-to-T or A-to-G conversions, recently developed C-to-G base editors (CGBEs) could produce C-to-G transversions. CGBEs convert cytosine within the editing window to abasic intermediates, which would be replaced with any base after base excision repair (BER). By far, though the efficiency and editing scope of CGBEs have been investigated in cultured cells via gRNA library and machine-learning, the viability of CGBEs in generating mouse models has not been adequately tested. In this study, we tested the C-to-G transversion efficiency of the CGBE1 and CGBE-XRCC1 systems in mouse embryos. Our results showed that both of the CGBE systems were able to mediate C-to-G transversion on 2 out of 3 targets tested, with up to 20% frequency within the editing window. Notably, most of the groups showed over 40% of other base conversions, predominantly C-to-T. Lastly, we successfully acquired the F mouse carrying a disease-causing mutation. In all, our study suggested that CGBEs systems held great potential in generating mouse models and indicated that XRCC1 based system is applicable in mouse embryos.
碱基编辑器 (BEs) 是在活生物体中生成单个碱基转换的高效且精确的工具。虽然大多数 BE 系统在介导 C 到 T 或 A 到 G 的转换方面受到限制,但最近开发的 C 到 G 碱基编辑器 (CGBEs) 可以产生 C 到 G 的颠换。CGBEs 将编辑窗口内的胞嘧啶转化为无碱基中间产物,该中间产物在碱基切除修复 (BER) 后会被任何碱基取代。尽管迄今为止,通过 gRNA 文库和机器学习在培养细胞中对 CGBEs 的效率和编辑范围进行了研究,但 CGBEs 在生成小鼠模型中的可行性尚未得到充分测试。在这项研究中,我们测试了 CGBE1 和 CGBE-XRCC1 系统在小鼠胚胎中进行 C 到 G 颠换的效率。我们的结果表明,这两种 CGBE 系统都能够在 3 个测试靶标中的 2 个靶标上介导 C 到 G 的颠换,在编辑窗口内的频率高达 20%。值得注意的是,大多数组显示出超过 40%的其他碱基转换,主要是 C 到 T。最后,我们成功获得了携带致病突变的 F 小鼠。总之,我们的研究表明 CGBEs 系统在生成小鼠模型方面具有巨大潜力,并表明基于 XRCC1 的系统适用于小鼠胚胎。