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母体因子Dppa3激活小鼠胚胎干细胞中的2C样基因并抑制DNA甲基化。

Maternal Factor Dppa3 Activates 2C-Like Genes and Depresses DNA Methylation in Mouse Embryonic Stem Cells.

作者信息

Zhang Chuanyu, Wen Hang, Liu Siying, Fu Enze, Yu Lu, Chen Shang, Han Qingsheng, Li Zongjin, Liu Na

机构信息

School of Medicine, Nankai University, Tianjin, China.

Key Laboratory of Bioactive Materials, Ministry of Education, College of Life Sciences Nankai University, Tianjin, China.

出版信息

Front Cell Dev Biol. 2022 Jun 3;10:882671. doi: 10.3389/fcell.2022.882671. eCollection 2022.

Abstract

Mouse embryonic stem cells (ESCs) contain a rare cell population of "two-cell embryonic like" cells (2CLCs) that display similar features to those found in the two-cell (2C) embryo and thus represent an model for studying the progress of zygotic genome activation (ZGA). However, the positive regulator determinants of the 2CLCs' conversion and ZGA have not been completely elucidated. Here, we identify a new regulator promoting 2CLCs and ZGA transcripts. Through a combination of overexpression (OE), knockdown (KD), together with transcriptional analysis and methylome analysis, we find that Dppa3 regulates the 2CLC-associated transcripts, DNA methylation, and 2CLC population in ESCs. The differentially methylated regions (DMRs) analysis identified 6,920 (98.2%) hypomethylated, whilst only 129 (1.8%) hypermethylated, regions in OE ESCs, suggesting that Dppa3 facilitates 2CLCs reprogramming. The conversion to 2CLCs by overexpression of is also associated with DNA damage response. knockdown manifest impairs transition into the 2C-like state. Global DNA methylome and chromatin state analysis of OE ESCs reveal that facilitates the chromatin configuration to 2CLCs reversion. Our finding for the first time elucidates a novel role of Dppa3 in mediating the 2CLC conversion, and suggests that Dppa3 is a new regulator for ZGA progress.

摘要

小鼠胚胎干细胞(ESCs)包含一种罕见的“二细胞胚胎样”细胞(2CLCs)群体,这些细胞表现出与二细胞(2C)胚胎中发现的细胞相似的特征,因此代表了一个研究合子基因组激活(ZGA)进程的模型。然而,2CLCs转化和ZGA的正向调节决定因素尚未完全阐明。在这里,我们鉴定出一种促进2CLCs和ZGA转录本的新调节因子。通过过表达(OE)、敲低(KD)以及转录分析和甲基化组分析相结合,我们发现Dppa3调节ESCs中与2CLCs相关的转录本、DNA甲基化和2CLCs群体。差异甲基化区域(DMRs)分析在OE ESCs中鉴定出6920个(98.2%)低甲基化区域,而只有129个(1.8%)高甲基化区域,这表明Dppa3促进2CLCs重编程。通过过表达 转化为2CLCs也与DNA损伤反应有关。敲低 明显损害向2C样状态的转变。对OE ESCs的全基因组DNA甲基化组和染色质状态分析表明, 促进染色质构型向2CLCs逆转。我们的发现首次阐明了Dppa3在介导2CLCs转化中的新作用,并表明Dppa3是ZGA进程的一个新调节因子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b2a/9203971/ad786dc9ce78/fcell-10-882671-g001.jpg

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