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新型偶氮甲碱-硫代氧代咪唑烷酮缀合物作为胞外5'-核苷酸酶抑制剂的评价:合成与分子对接研究

Appraisal of novel azomethine-thioxoimidazolidinone conjugates as ecto-5'-nucleotidase inhibitors: synthesis and molecular docking studies.

作者信息

Channar Pervaiz Ali, Bano Sehrish, Hassan Sidra, Perveen Fouzia, Saeed Aamer, Mahesar Parvez Ali, Khan Imtiaz Ali, Iqbal Jamshed

机构信息

Department of Chemistry, Quaid-I-Azam University Islamabad 45320 Pakistan

Department of Basic Sciences, Mathematics and Humanities, Dawood University of Engineering and Technology Karachi 74800 Pakistan.

出版信息

RSC Adv. 2022 Jun 14;12(27):17596-17606. doi: 10.1039/d2ra02675a. eCollection 2022 Jun 7.

Abstract

Purinergic signaling is regulated by a group of extracellular enzymes called ectonucleotidases. One of its members , ecto-5'-nucleotidase (-e5'NT) is involved in the final step of the enzymatic hydrolysis cascade that is the conversion of adenosine monophosphate (AMP) to adenosine and therefore, involves the regulation of adenosine level in extracellular space. The overexpression of -e5'NT has been observed in various pathological conditions such as hypoxia, inflammation and cancers, and led to various complications. Hence, the identification of a potent as well as selective inhibitor of -e5'NT is of greater importance in therapeutic treatment of various diseases. Azomethine-thioxoimidazolidinone derivatives were studied for their inhibition potential against e5'NT enzyme along with cytotoxic potential against cancer cell lines possessing overexpression of e5'NT enzyme. The derivative ()-3-((4-((3-methoxybenzyl)oxy)benzylidene)amino)-2-thioxoimidazolidin-4-one (4g) displayed selective and significant inhibition towards -e5'NT with an IC value of 0.23 ± 0.08 μM. While two other derivatives , ()-3-(((5-bromothiophen-2-yl)methylene)amino)-2-thioxoimidazolidin-4-one (4b) and 2-thioxo-3-((3,4,5-trimethoxybenzylidene)amino)imidazolidin-4-one (4e), exhibited non-selective potent inhibitory behavior against both human and rat enzymes. Moreover, these derivatives (4b, 4e and 4g) were further investigated for their effect on the expression of -e5'NT using quantitative real time polymerase chain reaction. Additionally, molecular docking and DFT studies were also performed to determine the putative binding mode of potent inhibitors within the enzyme active site. HOMO, LUMO, Δ, and molecular electrostatic potential maps were computed by DFT and the charge transfer regions within the molecules were identified to find out the regions for electrophilic and nucleophilic attack.

摘要

嘌呤能信号传导由一组称为胞外核苷酸酶的细胞外酶调节。其成员之一,胞外5'-核苷酸酶(ecto-5'-NT,-e5'NT)参与酶促水解级联反应的最后一步,即磷酸腺苷(AMP)转化为腺苷,因此,它涉及细胞外空间中腺苷水平的调节。在诸如缺氧、炎症和癌症等各种病理状况下已观察到-e5'NT的过表达,并导致了各种并发症。因此,鉴定一种有效的以及选择性的-e5'NT抑制剂在各种疾病的治疗中具有更重要的意义。研究了甲亚胺-硫代咪唑啉酮衍生物对e5'NT酶的抑制潜力以及对具有-e5'NT酶过表达的癌细胞系的细胞毒性潜力。衍生物()-3-((4-((3-甲氧基苄基)氧基)亚苄基)氨基)-2-硫代咪唑啉-4-酮(4g)对-e5'NT表现出选择性且显著的抑制作用,IC值为0.23±0.08μM。而另外两种衍生物,()-3-(((5-溴噻吩-2-基)亚甲基)氨基)-2-硫代咪唑啉-4-酮(4b)和2-硫代-3-((3,4,5-三甲氧基亚苄基)氨基)咪唑啉-4-酮(4e),对人和大鼠的酶均表现出非选择性的强效抑制行为。此外,使用定量实时聚合酶链反应进一步研究了这些衍生物(4b、4e和4g)对-e5'NT表达的影响。另外,还进行了分子对接和密度泛函理论(DFT)研究,以确定强效抑制剂在酶活性位点内的假定结合模式。通过DFT计算了最高已占分子轨道(HOMO)、最低未占分子轨道(LUMO)、能隙(Δ)和分子静电势图,并确定了分子内的电荷转移区域,以找出亲电和亲核攻击的区域。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bbb/9194930/1e783af71eae/d2ra02675a-s1.jpg

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