Department of Information Engineering, University of Padova, Padova, Italy.
Department of Woman and Child's Health, University of Padova, Padova, Italy.
Comput Methods Programs Biomed. 2022 Aug;223:106973. doi: 10.1016/j.cmpb.2022.106973. Epub 2022 Jun 24.
The increasing incidence of diabetes continuously stimulates the research on new antidiabetic drugs. Computer simulation can save time and costs, alleviating the need of animal trials and providing useful information for optimal experiment design and drug dosing. We recently presented a type 2 diabetes (T2D) simulator as tool for in silico testing of new molecules and guiding treatment optimization. Here we present a user-friendly interface aimed to increase the usability of the simulator.
The simulator, based on a large-scale glucose, insulin, and C-peptide model and equipped with 100 virtual subjects well describing system dynamics in a real T2D population, is extended to incorporate pharmacokinetics/pharmacodynamics (PK/PD) of a drug of interest. A graphical interface is developed on top of the simulator, allowing an easy design of in silico experiments: specifically, it is possible to select the population size to test, design the experiment (crossover or parallel), its duration and the sampling grid, choose glucose and insulin doses, and define treatment PK/PD and dose administered. The simulator also provides the outcome metrics requested by the user, and performs statistical comparisons among treatments and/or placebo.
To illustrate the potential of the simulator, we provided a case study using metformin and liraglutide. Literature-based PK/PD models of metformin and liraglutide have been incorporated in the simulator, by modulating key drug-sensitive model parameters. An in silico placebo-controlled trial has been done by simulating a three-arm meal tolerance test with subjects receiving placebo, metformin 850 mg, liraglutide 1.80 mg, respectively. The obtained results are in agreement with the clinical evidences, in terms of main glucose, insulin, and C-peptide outcome metrics.
We developed a user-friendly software interface for the T2D simulator to support the design and test of new antidiabetic drugs and treatments. This increases the simulator usability, making it suitable also for users who have low experience with computer programming.
糖尿病发病率的不断上升持续推动着新型抗糖尿病药物的研究。计算机模拟可以节省时间和成本,减轻动物试验的需求,并为最佳实验设计和药物剂量提供有用的信息。我们最近提出了一种 2 型糖尿病(T2D)模拟器,作为新分子体内测试和指导治疗优化的工具。本文介绍了一个用户友好的界面,旨在提高模拟器的可用性。
该模拟器基于一个大规模的葡萄糖、胰岛素和 C 肽模型,配备了 100 个虚拟个体,能够很好地描述真实 T2D 人群中的系统动力学,扩展后可纳入目标药物的药代动力学/药效动力学(PK/PD)。在模拟器之上开发了一个图形界面,允许轻松设计体内实验:具体来说,可以选择要测试的群体规模、设计实验(交叉或平行)、持续时间和采样网格、选择葡萄糖和胰岛素剂量,并定义治疗 PK/PD 和给药剂量。模拟器还提供用户请求的结果指标,并对治疗方法和/或安慰剂进行统计比较。
为了说明模拟器的潜力,我们提供了一个使用二甲双胍和利拉鲁肽的案例研究。通过调节关键的药物敏感模型参数,将二甲双胍和利拉鲁肽的基于文献的 PK/PD 模型纳入到模拟器中。通过模拟三臂餐后耐量试验,分别给予安慰剂、二甲双胍 850mg 和利拉鲁肽 1.80mg,进行了体内安慰剂对照试验。获得的结果与临床证据在主要的葡萄糖、胰岛素和 C 肽结果指标方面是一致的。
我们开发了一个用户友好的 T2D 模拟器软件界面,以支持新型抗糖尿病药物和治疗方法的设计和测试。这提高了模拟器的可用性,使其也适用于计算机编程经验较低的用户。