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丁香假单胞菌致病型的特异性检测:从终点PCR到实时PCR和高分辨率熔解分析

Specific Detection of Pseudomonas savastanoi Pathovars: From End-Point PCR to Real-Time PCR and HRMA.

作者信息

Tegli Stefania, Pastacaldi Chiara

机构信息

Department of Agriculture, Food, Environment and Forestry (DAGRI), Molecular Plant Pathology Lab, University of Florence, Florence, Italy.

出版信息

Methods Mol Biol. 2022;2536:263-272. doi: 10.1007/978-1-0716-2517-0_16.

Abstract

Pseudomonas savastanoi is a phytopathogenic bacterium causing severe disease on olive, oleander, ash, and other Oleaceae. Three main pathovars belong to this species: P. savastanoi pv. savastanoi, pv. nerii, and pv. fraxini. Detection methods are mostly based on the visual inspection of the typical symptoms (i.e., knots and galls). However, this bacterium can survive on the host plant also as an epiphyte without giving any symptom. To avoid the spread of P. savastanoi to areas where it is absent, it is necessary to develop efficient and sensitive detection methods. Here, we reported three different PCR-based techniques, able to discriminate the three P. savastanoi pathovars attacking woody plants.

摘要

丁香假单胞菌是一种植物致病细菌,可在橄榄、夹竹桃、白蜡树和其他木犀科植物上引发严重病害。该物种主要有三个致病型:丁香假单胞菌丁香致病型、夹竹桃致病型和白蜡树致病型。检测方法大多基于对典型症状(即瘤和瘿)的目视检查。然而,这种细菌也可以作为附生菌在寄主植物上存活而不产生任何症状。为避免丁香假单胞菌传播到其未出现的地区,有必要开发高效且灵敏的检测方法。在此,我们报告了三种基于聚合酶链反应的不同技术,它们能够区分侵袭木本植物的三种丁香假单胞菌致病型。

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