Department of Molecular Physiology and Biophysics, Center for Human Genetics Research, Vanderbilt University School of Medicine, Nashville, TN 37232-0700, USA.
Discipline of Psychiatry, Ingham Institute, University of New South Wales, 1 Campbell Street Liverpool, Sydney, NSW 2170, Australia.
Genes (Basel). 2022 Jul 4;13(7):1195. doi: 10.3390/genes13071195.
The human capacity to speak is fundamental to our advanced intellectual, technological and social development. Yet so very little is known regarding the evolutionary genetics of speech or its relationship with the broader aspects of evolutionary development in primates. In this study, we describe a large family with evolutionary retrograde development of the larynx and wrist. The family presented with severe speech impairment and incremental retrograde elongations of the pisiform in the wrist that limited wrist rotation from 180° to 90° as in primitive primates. To our surprise, we found that a previously unknown primate-specific gene had been disrupted in the family. emerged de novo in an ancestor of extant primates across a 540 kb region of the genome with a pre-existing highly conserved long-range laryngeal enhancer for a neighbouring bone morphogenetic protein gene . We used transgenic mouse modelling to identify two additional long-range enhancers within that regulate expression in the wrist. Disruption of in the affected family blocked the transcription of across the 3 enhancers in association with a reduction in expression and retrograde development of the larynx and wrist. Furthermore, we describe how developed a human-specific promoter through the expansion of a penta-nucleotide direct repeat that first emerged de novo in the promoter of in gibbon. This repeat subsequently expanded incrementally in higher hominids to form an overlapping series of Sp1/KLF transcription factor consensus binding sites in human that correlated with incremental increases in the promoter strength of with human having the strongest promoter. Our research indicates a dual evolutionary role for the incremental increases in transcriptional interference of enhancers in the incremental evolutionary development of the wrist and larynx in hominids and the human capacity to speak and their retrogression with the reduction of transcription in the affected family.
人类的说话能力是我们高级智力、技术和社会发展的基础。然而,我们对言语的进化遗传学及其与灵长类动物更广泛进化发展的关系知之甚少。在这项研究中,我们描述了一个具有喉和腕部进化逆行发育的大家庭。该家族表现出严重的言语障碍和腕部舟状骨逐渐逆行延长,导致腕部旋转度从 180°减少到 90°,类似于原始灵长类动物。令我们惊讶的是,我们发现一个以前未知的灵长类特异性基因在这个家族中发生了突变。 在现存灵长类动物的祖先中,跨越基因组的 540kb 区域内发生了从头出现的突变,该区域内存在一个预先存在的高度保守的长程喉增强子,用于邻近的骨形态发生蛋白基因 。我们使用转基因小鼠模型鉴定了 内另外两个 长程增强子,它们调节 基因在腕部的表达。受影响家族中的 突变导致 3 个增强子的转录受阻,与 基因表达减少和喉及腕部的逆行发育相关。此外,我们描述了 如何通过五核苷酸串联重复的扩展,在 gibbon 中,首次在 基因的启动子中发生从头出现的突变,从而形成一个人类特异性启动子。这个重复随后在更高等的人科动物中逐渐扩张,在人类中形成一系列重叠的 Sp1/KLF 转录因子结合位点,与 基因启动子强度的逐渐增加相关,而人类具有最强的启动子。我们的研究表明,在人科动物的腕部和喉部的渐进性进化发展以及人类的说话能力及其退行性变化中, 基因转录干扰的增量增加具有双重进化作用,而在受影响的家族中, 基因的转录减少。