Prahl Jordan, Coetzee Gerhard A
Department of Neurodegenerative Disease, Van Andel Institute, Grand Rapids, MI, United States.
Front Neurosci. 2022 Jul 11;16:889802. doi: 10.3389/fnins.2022.889802. eCollection 2022.
Genome-wide association studies have consistently shown that the alpha-synuclein locus is significantly associated with Parkinson's disease. The mechanism by which this locus modulates the disease pathology and etiology remains largely under-investigated. This is due to the assumption that is the only driver of the functional aspects of several single nucleotide polymorphism (SNP) risk-signals at this locus. Recent evidence has shown that the risk associated with the top GWAS-identified variant within this locus is independent of expression, calling into question the validity of assigning function to the nearest gene, . In this review, we examine additional genes and risk variants present at the locus and how they may contribute to Parkinson's disease. Using the locus as an example, we hope to demonstrate that deeper and detailed functional validations are required for high impact disease-linked variants.
全基因组关联研究一直表明,α-突触核蛋白基因座与帕金森病显著相关。该基因座调节疾病病理和病因的机制在很大程度上仍未得到充分研究。这是因为人们假定该基因座上几个单核苷酸多态性(SNP)风险信号的功能方面的唯一驱动因素是[此处原文缺失相关基因名称]。最近的证据表明,与该基因座内全基因组关联研究(GWAS)确定的最显著变异相关的风险与[此处原文缺失相关基因名称]表达无关,这对将功能赋予最邻近基因[此处原文缺失相关基因名称]的有效性提出了质疑。在这篇综述中,我们研究了该基因座上存在的其他基因和风险变异,以及它们可能如何导致帕金森病。以该基因座为例,我们希望证明对于与疾病相关的高影响力变异,需要进行更深入、详细的功能验证。