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串联 Cas13a/crRNA 介导的 CRISPR-FET 生物传感器:一种无需扩增的用于病毒的全能检测站。

Tandem Cas13a/crRNA-Mediated CRISPR-FET Biosensor: A One-for-All Check Station for Virus without Amplification.

机构信息

School of Laboratory Medicine, Hubei University of Chinese Medicine, 16 Huangjia Lake West Road, Wuhan 430065, P.R. China.

Hubei Provincial Hospital of Traditional Chinese Medicine, Wuhan 430061, China.

出版信息

ACS Sens. 2022 Sep 23;7(9):2680-2690. doi: 10.1021/acssensors.2c01200. Epub 2022 Sep 8.

Abstract

The path toward field-effect transistor (FET) application from laboratory to clinic has delivered a compelling push in the biomedical domain, yet ultrasensitive and timely pathogen identification without PCR remains a long-lasting challenge. Herein, we create a generic check station termed "CRISPR-FET", first incorporating the CRISPR/Cas13a system within the FET modality, for accelerated and unamplified detection of viral RNA. Unlike conventional FETs bearing target-specific receptors, this sensor holds three unique advancements: (i) an ingenious sensing mechanism is used, which converts the signal of a large-sized analyte into an on-chip cleavage response of an immobilized CRISPR reporter, enabling signal generation events to occur all within the Debye length; (ii) the multipurpose inspection of the CoV ORF1ab, CoV N gene, and HCV RNA unveils the potential for "one-for-all" scalable FET-based molecular diagnostics; and (iii) it is shown that Cas13a-crRNAs targeting different sites of the viral genome can be deployed in tandem to amplify the FET response, empowering the detection limit down to 1.56 aM, which is a world-record level of sensitivity in the FET for direct viral gene sensing. Notably, a brilliant clinical applicability was made in distinguishing HCV-infected patients from normal controls. Overall, this study sheds new insights into FET-based nucleic acid sensing technology and invokes a vision for its possible future roles in diagnosis of various viral diseases.

摘要

从实验室到临床,场效应晶体管(FET)的应用之路在生物医学领域带来了令人信服的推动,但无需 PCR 即可实现超灵敏和及时的病原体识别仍然是一个长期存在的挑战。在此,我们创建了一个通用的检测站,称为“CRISPR-FET”,首次将 CRISPR/Cas13a 系统整合到 FET 模式中,用于加速和非扩增检测病毒 RNA。与具有靶标特异性受体的传统 FET 不同,该传感器具有三个独特的优势:(i)采用巧妙的传感机制,将大尺寸分析物的信号转换为固定化 CRISPR 报告分子的片上切割反应,从而使信号产生事件都发生在德拜长度内;(ii)对 CoV ORF1ab、CoV N 基因和 HCV RNA 的多功能检测揭示了基于 FET 的“一换全有”可扩展分子诊断的潜力;(iii)表明可以串联使用靶向病毒基因组不同位点的 Cas13a-crRNAs 来放大 FET 响应,将检测限降低至 1.56 aM,这是 FET 直接检测病毒基因的灵敏度的世界纪录水平。值得注意的是,在区分 HCV 感染患者和正常对照方面取得了出色的临床适用性。总的来说,本研究为基于 FET 的核酸传感技术提供了新的见解,并为其在各种病毒疾病诊断中的可能未来角色提出了展望。

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