Helwer Rafe, Charette J Michael
Department of Chemistry, Brandon University, Brandon, Manitoba, Canada.
Children's Hospital Research Institute of Manitoba, Winnipeg, Manitoba, Canada.
MicroPubl Biol. 2022 Sep 22;2022. doi: 10.17912/micropub.biology.000606. eCollection 2022.
RNA helicases are involved in nearly all aspects of RNA metabolism and factor prominently in ribosome assembly. The SSU processome includes 10 helicases and many helicase-cofactors. Together, they mediate the structural rearrangements that occur as part of ribosomal SSU assembly. During the identification of the SSU processome component Utp25/Def, it was noticed that the protein displays some sequence similarity to DEAD-box RNA helicases and is essential for growth. Interestingly, mutational ablation showed that Utp25's DEAD-box motifs are dispensable. Here, we show that the Utp25 AlphaFold prediction displays considerable structural similarity to DEAD-box helicases and is the first fully validated pseudohelicase.
RNA解旋酶几乎参与RNA代谢的各个方面,在核糖体组装中起着重要作用。小亚基加工体包含10种解旋酶和许多解旋酶辅助因子。它们共同介导核糖体小亚基组装过程中发生的结构重排。在鉴定小亚基加工体组分Utp25/Def时,注意到该蛋白与DEAD盒RNA解旋酶有一些序列相似性,并且对生长至关重要。有趣的是,突变消除表明Utp25的DEAD盒基序是可有可无的。在这里,我们表明Utp25的AlphaFold预测与DEAD盒解旋酶具有相当大的结构相似性,并且是第一个经过充分验证的假解旋酶。