Institute of Microbiology, Leibniz University Hannover, Hannover, Germany.
Department of Mycology, University of Bayreuth, Bayreuth, Germany.
Environ Microbiol. 2023 Dec;25(12):2681-2697. doi: 10.1111/1462-2920.16234. Epub 2022 Oct 28.
Environmental microplastic (MP) is ubiquitous in aquatic and terrestrial ecosystems providing artificial habitats for microbes. Mechanisms of MP colonization, MP polymer impacts, and effects on soil microbiomes are largely unknown in terrestrial systems. Therefore, we experimentally tested the hypothesis that MP polymer type is an important deterministic factor affecting MP community assembly by incubating common MP polymer types in situ in landfill soil for 14 months. 16S rRNA gene amplicon sequencing indicated that MP polymers have specific impacts on plastisphere microbiomes, which are subsets of the soil microbiome. Chloroflexota, Gammaproteobacteria, certain Nitrososphaerota, and Nanoarchaeota explained differences among MP polymers and time points. Plastisphere microbial community composition derived from different MP diverged over time and was enriched in potential pathogens. PICRUSt predictions of pathway abundances and quantitative PCR of functional marker genes indicated that MP polymers exerted an ambivalent effect on genetic potentials of biogeochemical cycles. Overall, the data indicate that (i) polymer type as deterministic factor rather than stochastic factors drives plastisphere community assembly, (ii) MP impacts greenhouse gas metabolism, xenobiotic degradation and pathogen distribution, and (iii) MP serves as an ideal model system for studying fundamental questions in microbial ecology such as community assembly mechanisms in terrestrial environments.
环境微塑料(MP)广泛存在于水生和陆地生态系统中,为微生物提供了人工栖息地。MP 聚合物的定殖机制、MP 聚合物的影响以及对土壤微生物组的影响在陆地系统中很大程度上是未知的。因此,我们通过将常见的 MP 聚合物类型在垃圾填埋场土壤中现场孵育 14 个月,实验测试了 MP 聚合物类型是影响 MP 群落组装的重要决定因素的假设。16S rRNA 基因扩增子测序表明,MP 聚合物对质体微生物组(土壤微生物组的子集)具有特定的影响。Chloroflexota、Gammaproteobacteria、某些 Nitrososphaerota 和 Nanoarchaeota 解释了 MP 聚合物之间和时间点之间的差异。来自不同 MP 的质体微生物群落组成随时间推移而发散,并富含潜在的病原体。途径丰度的 PICRUSt 预测和功能标记基因的定量 PCR 表明,MP 聚合物对生物地球化学循环的遗传潜力产生了矛盾的影响。总的来说,这些数据表明:(i) 聚合物类型作为决定性因素,而不是随机因素,驱动着质体群落的组装;(ii) MP 影响温室气体代谢、异生物质降解和病原体分布;(iii) MP 是研究陆地环境中微生物生态学基本问题(如群落组装机制)的理想模型系统。