Ilouz Nili, Harazi Avi, Guttman Miriam, Daya Alon, Ruppo Shmuel, Yakovlev Lena, Mitrani-Rosenbaum Stella
Goldyne Savad Institute of Gene Therapy, Hadassah Medical Center, The Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, Israel.
Faculty of Marine Sciences, Ruppin Academic Center, Michmoret, Israel.
Front Genome Ed. 2022 Sep 27;4:930110. doi: 10.3389/fgeed.2022.930110. eCollection 2022.
GNE myopathy is an adult onset neuromuscular disorder characterized by slowly progressive distal and proximal muscle weakness, caused by missense recessive mutations in the gene. Although the encoded bifunctional enzyme is well known as the limiting factor in the biosynthesis of sialic acid, no clear mechanisms have been recognized to account for the muscle atrophic pathology, and novel functions for GNE have been hypothesized. Two major issues impair studies on this protein. First, the expression of the GNE protein is minimal in human and mice muscles and there is no reliable antibody to follow up endogenous expression. Second, no reliable animal model is available for the disease and cellular models from GNE myopathy patients' muscle cells (expressing the mutated protein) are less informative than expected. In order to broaden our knowledge on GNE functions in muscle, we have taken advantage of the CRISPR/Cas9 method for genome editing to first, add a tag to the endogenous Gne gene in mouse, allowing the determination of the spatiotemporal expression of the protein in the organism, using well established and reliable antibodies against the specific tag. In addition we have generated a Gne knock out murine muscle cell lineage to identify the events resulting from the total lack of the protein. A thorough multi-omics analysis of both cellular systems including transcriptomics, proteomics, phosphoproteomics and ubiquitination, unraveled novel pathways for Gne, in particular its involvement in cell cycle control and in the DNA damage/repair pathways. The elucidation of fundamental mechanisms of Gne in normal muscle may contribute to the identification of the disrupted functions in GNE myopathy, thus, to the definition of novel biomarkers and possible therapeutic targets for this disease.
GNE肌病是一种成人起病的神经肌肉疾病,其特征为缓慢进展的远端和近端肌肉无力,由该基因中的错义隐性突变引起。尽管编码的双功能酶是唾液酸生物合成中的已知限制因素,但尚未明确认识到导致肌肉萎缩病理的机制,并且有人推测GNE具有新功能。有两个主要问题妨碍了对该蛋白的研究。首先,GNE蛋白在人和小鼠肌肉中的表达极少,并且没有可靠的抗体来追踪内源性表达。其次,尚无针对该疾病的可靠动物模型,来自GNE肌病患者肌肉细胞(表达突变蛋白)的细胞模型提供的信息比预期的要少。为了拓宽我们对GNE在肌肉中功能的认识,我们利用CRISPR/Cas9基因组编辑方法,首先在小鼠内源性Gne基因上添加一个标签,使用针对特定标签的成熟且可靠的抗体,来确定该蛋白在生物体中的时空表达。此外,我们还生成了一个Gne基因敲除的小鼠肌肉细胞系,以识别由于该蛋白完全缺失而导致的事件。对这两个细胞系统进行全面的多组学分析,包括转录组学、蛋白质组学、磷酸蛋白质组学和泛素化分析,揭示了Gne的新途径,特别是其在细胞周期控制和DNA损伤/修复途径中的作用。阐明Gne在正常肌肉中的基本机制可能有助于确定GNE肌病中被破坏的功能,从而确定该疾病的新生物标志物和可能的治疗靶点。