Huang Jiao, Ai Guomin, Liu Ning, Huang Ying
State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China.
Microorganisms. 2022 Sep 29;10(10):1935. doi: 10.3390/microorganisms10101935.
The Qinghai-Tibet Plateau (QTP) is known for extreme natural environments and, surprisingly, has been reported to contain widespread organic pollutants. can survive a variety of extreme environments and degrade many organic contaminants. Here, we isolated a strain (FXJ9.536 = CGMCC 4.7853) from a soil sample collected in the QTP. Phylogenomic analysis indicated that the strain represents a novel species, for which the name sp. nov. is proposed. Interestingly, FXJ9.536 maintained a fast growth rate and degraded 6.2% of -nitrophenol (4-NP) and 50.0% of malathion even at 10 °C. It could degrade 53.6% of 4-NP and 99.9% of malathion at a moderate temperature. The genome of FXJ9.536 contains 4-hydroxyphenylacetate 3-monoxygenase and carboxylesterase genes, which are likely associated with the degradation of 4-NP and malathion, respectively. Further genomic analysis revealed that the strain might employ multiple strategies to adapt to the harsh QTP environment. These include synthesizing cold shock proteins, compatible solutes, secondary metabolites, and storage compounds, utilizing inorganic compounds as energy and nutrition sources, as well as degrading a range of organic pollutants. Overall, our study reveals the potential of a QTP-derived new actinobacterial species for environmental adaptation and remediation in cold regions.
青藏高原(QTP)以极端的自然环境而闻名,令人惊讶的是,据报道该地区含有广泛的有机污染物。[具体微生物名称]能够在各种极端环境中生存并降解许多有机污染物。在此,我们从青藏高原采集的土壤样本中分离出了一株菌株(FXJ9.536 = CGMCC 4.7853)。系统基因组分析表明,该菌株代表一个新的[具体微生物类别]物种,为此提出了新物种名称[具体名称] sp. nov.。有趣的是,FXJ9.536即使在10°C时仍保持快速生长速率,能降解6.2%的对硝基苯酚(4-NP)和50.0%的马拉硫磷。在中等温度下,它能降解53.6%的4-NP和99.9%的马拉硫磷。FXJ9.536的基因组包含4-羟基苯乙酸3-单加氧酶和羧酸酯酶基因,它们可能分别与4-NP和马拉硫磷的降解有关。进一步的基因组分析表明,该菌株可能采用多种策略来适应青藏高原恶劣的环境。这些策略包括合成冷休克蛋白、相容性溶质、次生代谢产物和储存化合物,利用无机化合物作为能量和营养来源,以及降解一系列有机污染物。总体而言,我们的研究揭示了一种源自青藏高原的新型放线菌物种在寒冷地区环境适应和修复方面的潜力。