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低水平的亲缘关系有助于通过近亲标记重捕法对西大西洋蓝鳍金枪鱼丰度进行估算。

Low levels of sibship encourage use of larvae in western Atlantic bluefin tuna abundance estimation by close-kin mark-recapture.

机构信息

Virginia Institute of Marine Science, William and Mary, Gloucester Point, VA, USA.

CSIRO Oceans and Atmosphere, Hobart, TAS, Australia.

出版信息

Sci Rep. 2022 Nov 3;12(1):18606. doi: 10.1038/s41598-022-20862-9.

Abstract

Globally, tunas are among the most valuable fish stocks, but are also inherently difficult to monitor and assess. Samples of larvae of Western Atlantic bluefin tuna Thunnus thynnus (Linnaeus, 1758) from standardized annual surveys in the northern Gulf of Mexico provide a potential source of "offspring" for close-kin mark-recapture (CKMR) estimates of abundance. However, the spatial patchiness and highly skewed numbers of larvae per tow suggest sampled larvae may come from a small number of parents, compromising the precision of CKMR. We used high throughput genomic profiling to study sibship within and among larval tows from the 2016 standardized Gulf-wide survey compared to targeted sampling carried out in 2017. Full- and half-siblings were found within both years, with 12% of 156 samples in 2016 and 56% of 317 samples in 2017 having at least one sibling. There were also two pairs of cross cohort half-siblings. Targeted sampling increased the number of larvae collected per sampling event but resulted in a higher proportion of siblings. The combined effective sample size across both years was about 75% of the nominal size, indicating that Gulf of Mexico larval collections could be a suitable source of juveniles for CKMR in Western Atlantic bluefin tuna.

摘要

全球范围内,金枪鱼是最具价值的鱼类资源之一,但也很难对其进行监测和评估。从墨西哥湾北部标准化年度调查中采集的大西洋西部金枪鱼幼鱼(Thunnus thynnus)样本,为近亲标记重捕(CKMR)估计丰度提供了一种潜在的“后代”来源。然而,幼鱼样本的空间斑块性和每拖网数量的高度偏态分布表明,采样幼鱼可能来自少数几个亲体,从而影响 CKMR 的精度。我们使用高通量基因组分析技术,比较了 2016 年海湾-wide 标准化调查中的幼鱼拖网样本和 2017 年目标采样样本中的亲缘关系。在这两年中都发现了全同胞和半同胞,2016 年的 156 个样本中有 12%,2017 年的 317 个样本中有 56%至少有一个兄弟姐妹。还有两对跨龄半同胞。目标采样增加了每次采样事件中收集的幼鱼数量,但导致兄弟姐妹的比例更高。这两年的组合有效样本量约为名义样本量的 75%,这表明墨西哥湾的幼鱼收集可以成为大西洋西部金枪鱼 CKMR 的合适的幼鱼来源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/949b/9633702/725478fd6391/41598_2022_20862_Fig1_HTML.jpg

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