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阿尔茨海默病以单细胞分辨率改变自然杀伤细胞的转录组特征。

Alzheimer's disease alters the transcriptomic profile of natural killer cells at single-cell resolution.

机构信息

Department of Neurology, Tianjin Neurological Institute, Tianjin Medical University General Hospital, Tianjin, China.

出版信息

Front Immunol. 2022 Nov 2;13:1004885. doi: 10.3389/fimmu.2022.1004885. eCollection 2022.


DOI:10.3389/fimmu.2022.1004885
PMID:36405736
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9666759/
Abstract

Alzheimer's disease (AD) is the most common dementia without an effective cure at least partially due to incomplete understanding of the disease. Inflammation has emerged as a central player in the onset and progression of AD. As innate lymphoid cells, natural killer (NK) cells orchestrate the initiation and evolution of inflammatory responses. Yet, the transcriptomic features of NK cells in AD remain poorly understood. We assessed the diversity of NK cells using web-based single-cell RNA sequencing data of blood NK cells from patients with AD and control subjects and flow cytometry. We identified a contraction of NK cell compartment in AD, accompanied by a reduction of cytotoxicity. Unbiased clustering revealed four subsets of NK cells in AD, i.e., CD56 NK cells, CD56 effector NK cells, adaptive NK cells, and a unique NK cell subset that is expanded and characterized by upregulation of CX3CR1, TBX21, MYOM2, DUSP1, and ZFP36L2, and negatively correlated with cognitive function in AD patients. Pseudo-temporal analysis revealed that this unique NK cell subset was at a late stage of NK cell development and enriched with transcription factors TBX21, NFATC2, and SMAD3. Together, our study identified a distinct NK cell subset and its potential involvement in AD.

摘要

阿尔茨海默病(AD)是最常见的痴呆症,目前尚无有效的治疗方法,部分原因是对该疾病的了解不完整。炎症已成为 AD 发病和进展的核心因素。自然杀伤(NK)细胞作为先天淋巴细胞,协调炎症反应的启动和演变。然而,AD 中 NK 细胞的转录组特征仍知之甚少。我们使用基于网络的 AD 患者和对照者血液 NK 细胞的单细胞 RNA 测序数据以及流式细胞术评估了 NK 细胞的多样性。我们发现 AD 中 NK 细胞区室收缩,同时细胞毒性降低。无偏聚类揭示了 AD 中的四个 NK 细胞亚群,即 CD56 NK 细胞、CD56 效应 NK 细胞、适应性 NK 细胞和一个独特的 NK 细胞亚群,该亚群扩增并表现为 CX3CR1、TBX21、MYOM2、DUSP1 和 ZFP36L2 的上调,与 AD 患者的认知功能呈负相关。拟时分析表明,这个独特的 NK 细胞亚群处于 NK 细胞发育的晚期阶段,富含转录因子 TBX21、NFATC2 和 SMAD3。总之,我们的研究确定了一个独特的 NK 细胞亚群及其在 AD 中的潜在作用。

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Front Immunol. 2025-7-16

[2]
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[3]
Hypoxic Natural Killer Cells-Derived HIF-1α-Containing Exosomes Inhibit Cellular Senescence and Apoptosis in Neurocytes to Ameliorate Alzheimer's Disease by Eliminating Oxidative Damages.

Mol Neurobiol. 2025-6-7

[4]
Shared interactions of six neurotropic viruses with 38 human proteins: a computational and literature-based exploration of viral interactions and hijacking of human proteins in neuropsychiatric disorders.

Discov Ment Health. 2025-2-22

[5]
Treatment of Alzheimer's Disease subjects with expanded non-genetically modified autologous natural killer cells (SNK01): a phase I study.

Alzheimers Res Ther. 2025-2-12

[6]
Bioinformatics insights into mitochondrial and immune gene regulation in Alzheimer's disease.

Eur J Med Res. 2025-2-8

[7]
Integrative bioinformatic approach reveals novel melatonin-related biomarkers for Alzheimer's disease.

Sci Rep. 2025-2-4

[8]
Cell-specific transcriptional signatures of vascular cells in Alzheimer's disease: perspectives, pathways, and therapeutic directions.

Mol Neurodegener. 2025-1-29

[9]
Senescent brain cell types in Alzheimer's disease: Pathological mechanisms and therapeutic opportunities.

Neurotherapeutics. 2025-4

[10]
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Alzheimers Dement. 2024-12

本文引用的文献

[1]
Multidimensional single-cell analysis of human peripheral blood reveals characteristic features of the immune system landscape in aging and frailty.

Nat Aging. 2022-4

[2]
Expression of Immune Related Genes and Possible Regulatory Mechanisms in Alzheimer's Disease.

Front Immunol. 2021

[3]
Single-Cell RNA Sequencing of Peripheral Blood Reveals Immune Cell Signatures in Alzheimer's Disease.

Front Immunol. 2021

[4]
Integrated analysis of multimodal single-cell data.

Cell. 2021-6-24

[5]
Neuroblast senescence in the aged brain augments natural killer cell cytotoxicity leading to impaired neurogenesis and cognition.

Nat Neurosci. 2021-1

[6]
Single-cell profiling reveals the trajectories of natural killer cell differentiation in bone marrow and a stress signature induced by acute myeloid leukemia.

Cell Mol Immunol. 2021-5

[7]
Depletion of NK Cells Improves Cognitive Function in the Alzheimer Disease Mouse Model.

J Immunol. 2020-7-15

[8]
Single-cell transcriptomics of blood reveals a natural killer cell subset depletion in tuberculosis.

EBioMedicine. 2020-2-27

[9]
Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis.

Nat Commun. 2020-1-14

[10]
Heterogeneity of human bone marrow and blood natural killer cells defined by single-cell transcriptome.

Nat Commun. 2019-9-2

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