Intimate Partner Violence (IPV) has been associated with cognitive, emotional, physical and physiological alterations, and with the presence of anxiety disorders. There is not enough research on this problem from an interdisciplinary approach despite the above. Therefore, this research compared the emotion perception and electrophysiological responses, elicited by an emotional task, in women who had experienced IPV and women who had not (WIPV). Forty-five participants (22 with and 23 without IPV experience) were presented with nine images from the International Affective Picture System (IAPS) database and performed a self-report using the Self-Assessment Manikin (SAM). In parallel, electrophysiological signals (ECG and EEG) were acquired, for the analysis of emotional response. In the between-group analysis, the IPV group showed lower perceived dominance and greater central asymmetry in the alpha band than the WIPV group; additionally, the IPV group exhibited a significant positive correlation between the valence of the images and the alpha band power in central areas. In the within-group analysis, the WIPV group showed greater activation in the alpha band and alpha/beta ratio in frontal areas during the emotional elicitation, as compared to baseline. Furthermore, the ECG analysis showed that, for the IPV group, there was a decrease in the power of the high-frequency (HF) band and an increase in the power of the very-low-frequency (VLF) band of heart rate variability (HRV) during the elicitation stage. It is hypothesized that the IPV group could present higher stress levels and greater physiological activity during emotional stimuli than the WIPV group. Possible changes in emotional regulation and anxiety levels due to IPV experiences are discussed.