Hematology and Oncology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.
Department of Basic Oncology, Health Institute of Ege University, Izmir, Türkiye.
Horm Mol Biol Clin Investig. 2023 Jan 2;44(2):145-152. doi: 10.1515/hmbci-2022-0007. eCollection 2023 Jun 1.
OBJECTIVES: Epigenetic alterations like methylation of tumor suppressor genes or oncogenes, in respiratory epithelium have been associated with lung cancer. Hypermethylation of genes promoter is an epigenetic event, and is responsible to tumor suppressor genes inactivation as well as oncogenes activation. This study aimed to assess the role of methylation status in promoter of and genes their potential implication in the pathogenesis of lung tumor in Iranian patients. METHODS: In this study, we collected 100 tissue samples (50 lung cancer tissues and 50 adjacent non-cancerous lung tissues) from Iranian lung cancer patients. The genomic DNA was extracted, and methylation status of both and genes was investigated by methylation-sensitive high-resolution melting (MS-HRM) assay technique and Real-Time PCR. Cancer Genome Atlas (TCGA) dataset was also analyzed for further validation of the gene's methylation. RESULTS: Methylation of gene promoter was significantly higher in lung tumor tissues. However, promoter methylation levels of gene was significantly lower in lung tumor tissues. These results were additionally confirmed by TCGA analysis. Promoter methylation of both and genes was significantly associated with lymph node metastasis, and clinical stage of lung cancer. The receiver operating characteristic (ROC) curve analysis indicated a high accuracy of promoter methylation in these genes as a diagnostic biomarker for lung cancer. CONCLUSIONS: Methylation levels of both and genes promoters were associated with lung cancer pathogenesis in Iranian population, and may be a suitable biomarker for diagnosis and prognosis of lung cancer in early stage of tumorigenesis.
目的:肿瘤抑制基因或癌基因的甲基化等表观遗传改变与肺癌有关。基因启动子的高甲基化是一种表观遗传事件,负责肿瘤抑制基因失活以及癌基因激活。本研究旨在评估 和 基因启动子甲基化状态在伊朗患者肺癌发病机制中的作用及其潜在意义。
方法:在这项研究中,我们收集了 100 份来自伊朗肺癌患者的组织样本(50 份肺癌组织和 50 份相邻非癌性肺组织)。提取基因组 DNA,采用甲基敏感高分辨率熔解(MS-HRM)分析技术和实时 PCR 检测 和 基因的甲基化状态。还分析了癌症基因组图谱(TCGA)数据集,以进一步验证基因的甲基化。
结果:肺癌组织中 基因启动子的甲基化明显升高。然而,肺癌组织中 基因启动子的甲基化水平明显降低。这些结果通过 TCGA 分析得到了进一步证实。 和 基因启动子的甲基化与淋巴结转移和肺癌的临床分期显著相关。受试者工作特征(ROC)曲线分析表明,这些基因的启动子甲基化作为肺癌的诊断生物标志物具有很高的准确性。
结论: 和 基因启动子的甲基化水平与伊朗人群肺癌的发病机制有关,可能是早期肿瘤发生时诊断和预后肺癌的合适生物标志物。
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