Ressler Andrew K, Sampaio Gabriela L A, Dugger Sarah A, Sapir Tamar, Krizay Daniel, Boland Michael J, Reiner Orly, Goldstein David B
Institute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY 10032, USA.
Department of Genetics and Development, Columbia University Irving Medical Center, New York, NY 10032, USA.
iScience. 2022 Dec 10;26(1):105797. doi: 10.1016/j.isci.2022.105797. eCollection 2023 Jan 20.
Generating effective therapies for neurodevelopmental disorders has remained elusive. An emerging drug discovery approach for neurodevelopmental disorders is to characterize transcriptome-wide dysregulation in an appropriate model system and screen therapeutics based on their capacity to restore functionally relevant expression patterns. We characterized transcriptomic dysregulation in a human model of -related disorder to explore the potential of such a paradigm. We identified widespread dysregulation in functionally relevant pathways and then compared dysregulation in a human model to transcriptomic differences in embryonic and perinatal mice to determine whether dysregulation in an human model is partially replicated in an model of -related disorder. Strikingly, we find enrichment of co-dysregulation between 45-day-old human organoids and embryonic, but not perinatal, mice from distinct models of -related disorder. Thus, hnRNPU deficient human organoids may only be suitable to model transcriptional dysregulation in certain cell types within a specific developmental time window.
为神经发育障碍生成有效的治疗方法一直难以实现。一种新兴的神经发育障碍药物发现方法是在合适的模型系统中表征全转录组失调,并根据其恢复功能相关表达模式的能力筛选治疗药物。我们在一种与相关疾病的人类模型中表征了转录组失调,以探索这种范式的潜力。我们在功能相关途径中发现了广泛的失调,然后将人类模型中的失调与胚胎期和围产期小鼠的转录组差异进行比较,以确定人类模型中的失调是否在相关疾病的模型中部分复制。令人惊讶的是,我们发现来自不同相关疾病模型的45天大的人类类器官与胚胎期而非围产期小鼠之间存在共失调富集。因此,hnRNPU缺陷的人类类器官可能仅适用于在特定发育时间窗口内的某些细胞类型中模拟转录失调。