Gulati Pallavi, Chadha Jatin, Harjai Kusum, Singh Sandeepa
Department of Microbiology, University of Delhi, New Delhi, India.
Department of Microbiology, Panjab University, Chandigarh, India.
Front Microbiol. 2023 Jan 5;13:1073419. doi: 10.3389/fmicb.2022.1073419. eCollection 2022.
The monkeypox virus (MPXV) has become a major threat due to the increasing global caseload and the ongoing multi-country outbreak in non-endemic territories. Due to limited research in this avenue and the lack of intervention strategies, the present study was aimed to virtually screen bioactive phytochemicals against envelope proteins of MPXV rigorous computational approaches. Molecular docking, molecular dynamic (MD) simulations, and MM/PBSA analysis were used to investigate the binding affinity of 12 phytochemicals against three envelope proteins of MPXV, ., D13, A26, and H3. Silibinin, oleanolic acid, and ursolic acid were computationally identified as potential phytochemicals that showed strong binding affinity toward all the tested structural proteins of MPXV through molecular docking. The stability of the docked complexes was also confirmed by MD simulations and MM/PBSA calculations. Results from the iMODS server also complemented the findings from molecular docking and MD simulations. ADME analysis also computationally confirmed the drug-like properties of the phytochemicals, thereby asserting their suitability for consumption. Hence, this study envisions the candidature of bioactive phytochemicals as promising inhibitors against the envelope proteins of the MPXV, serving as template molecules that could further be experimentally evaluated for their efficacy against monkeypox.
由于全球病例数不断增加以及在非流行地区持续出现多国疫情,猴痘病毒(MPXV)已成为一个重大威胁。鉴于在这一领域的研究有限且缺乏干预策略,本研究旨在通过严格的计算方法虚拟筛选针对MPXV包膜蛋白的生物活性植物化学物质。采用分子对接、分子动力学(MD)模拟和MM/PBSA分析来研究12种植物化学物质对MPXV的三种包膜蛋白(即D13、A26和H3)的结合亲和力。通过分子对接,水飞蓟宾、齐墩果酸和熊果酸在计算上被确定为对MPXV所有测试结构蛋白表现出强结合亲和力的潜在植物化学物质。MD模拟和MM/PBSA计算也证实了对接复合物的稳定性。iMODS服务器的结果也补充了分子对接和MD模拟的结果。ADME分析在计算上也证实了这些植物化学物质的类药物性质,从而表明它们适合食用。因此,本研究设想生物活性植物化学物质有望成为MPXV包膜蛋白的抑制剂,作为模板分子,可进一步通过实验评估其抗猴痘的疗效。