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乳蛋白基因家族的分子特征及系统进化分析

Molecular Characterization and Phylogenetic Analysis of Casein Gene Family in .

机构信息

Guangdong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, School of Life Science and Engineering, Foshan University, Foshan 528225, China.

Guangxi Key Laboratory of Beibu Gulf Marine Biodiversity Conservation, Beibu Gulf University, Guangxi 535011, China.

出版信息

Genes (Basel). 2023 Jan 18;14(2):256. doi: 10.3390/genes14020256.

Abstract

Camel milk is known for its exceptional medical uses. It has been used since ancient times to treat infant diarrhea, hepatitis, insulin-dependent diabetes (IDDM), lactose intolerance, alcohol-induced liver damage, allergies, and autism. It has the power to treat several diseases, with cancer being the most significant. This study investigated the evolutionary relationship, physiochemical characteristics, and comparative genomic analysis of the casein gene family (CSN1S1, CSN2, CSN1S2, and CSN3) in . Molecular phylogenetics showing the camelid species clustered casein nucleotide sequences into four groups: CSN1S1, CSN2, CSN1S2, and CSN3. The casein proteins from camels were evaluated and found to be unstable, thermostable, and hydrophilic. CSN1S2, CSN2, and CSN3 were acidic, but CSN1S1 was basic. CSN1S1 showed positive selection for one amino acid (Q), CSN1S2 and CSN2 for three (T, K, Q), and CSN3 showed no positive selection. We also compared high-milk-output species such as cattle () and low-milk-yield species such as sheep () with camels () and discovered that YY1 sites are more frequent in sheep than in camels and very low in cattle. We concluded that the ratio of YY1 sites in these species may affect milk production.

摘要

驼奶具有独特的医疗用途。自古以来,它就被用于治疗婴儿腹泻、肝炎、胰岛素依赖型糖尿病 (IDDM)、乳糖不耐受、酒精性肝损伤、过敏和自闭症。它具有治疗多种疾病的功效,其中癌症最为显著。本研究探讨了. 中的酪蛋白基因家族(CSN1S1、CSN2、CSN1S2 和 CSN3)的进化关系、理化特性和比较基因组分析。分子系统发育表明,骆驼科物种的酪蛋白核苷酸序列聚类为四个组:CSN1S1、CSN2、CSN1S2 和 CSN3。评估了来自骆驼的酪蛋白,发现其不稳定、热稳定和亲水。CSN1S2、CSN2 和 CSN3 呈酸性,但 CSN1S1 呈碱性。CSN1S1 有一个氨基酸(Q)发生正选择,CSN1S2 和 CSN2 有三个氨基酸(T、K、Q)发生正选择,CSN3 没有发生正选择。我们还将产奶量高的物种(如牛())和产奶量低的物种(如绵羊())与骆驼()进行了比较,发现绵羊中的 YY1 位点比骆驼多,而在牛中则非常少。我们得出的结论是,这些物种中 YY1 位点的比例可能会影响产奶量。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f3d/9957437/417242482b29/genes-14-00256-g001.jpg

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