Department of Epidemiology and Health Statistics, School of Public Health, Chongqing Medical University, Yixue Road, Chongqing 400016, China.
Cells. 2023 Feb 27;12(5):755. doi: 10.3390/cells12050755.
Increasing evidence confirms that tumor microenvironment (TME) can influence tumor progression and treatment, but TME is still understudied in adrenocortical carcinoma (ACC). In this study, we first scored TME using the xCell algorithm, then defined genes associated with TME, and then used consensus unsupervised clustering analysis to construct TME-related subtypes. Meanwhile, weighted gene co-expression network analysis was used to identify modules correlated with TME-related subtypes. Ultimately, the LASSO-Cox approach was used to establish a TME-related signature. The results showed that TME-related scores in ACC may not correlate with clinical features but do promote a better overall survival. Patients were classified into two TME-related subtypes. Subtype 2 had more immune signaling features, higher expression of immune checkpoints and MHC molecules, no CTNNB1 mutations, higher infiltration of macrophages and endothelial cells, lower tumor immune dysfunction and exclusion scores, and higher immunophenoscore, suggesting that subtype 2 may be more sensitive to immunotherapy. 231 modular genes highly relevant to TME-related subtypes were identified, and a 7-gene TME-related signature that independently predicted patient prognosis was established. Our study revealed an integrated role of TME in ACC and helped to identify those patients who really responded to immunotherapy, while providing new strategies on risk management and prognosis prediction.
越来越多的证据证实肿瘤微环境(TME)可以影响肿瘤的进展和治疗,但 TME 在肾上腺皮质癌(ACC)中的研究仍不够充分。在本研究中,我们首先使用 xCell 算法对 TME 进行评分,然后定义与 TME 相关的基因,接着使用共识无监督聚类分析构建 TME 相关的亚型。同时,使用加权基因共表达网络分析鉴定与 TME 相关亚型相关的模块。最终,使用 LASSO-Cox 方法建立 TME 相关的特征。结果表明,ACC 中的 TME 相关评分可能与临床特征无关,但确实可以促进更好的总生存。患者被分为两个 TME 相关的亚型。亚型 2 具有更多的免疫信号特征,更高的免疫检查点和 MHC 分子的表达,没有 CTNNB1 突变,巨噬细胞和内皮细胞浸润更高,肿瘤免疫功能障碍和排除评分更低,免疫表型评分更高,提示亚型 2 可能对免疫治疗更敏感。鉴定出 231 个与 TME 相关亚型高度相关的模块基因,并建立了一个独立预测患者预后的 7 基因 TME 相关特征。我们的研究揭示了 TME 在 ACC 中的综合作用,有助于识别那些真正对免疫治疗有反应的患者,同时为风险管理和预后预测提供了新的策略。