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通过光谱和量热实验探索铜绿假单胞菌 III 型分泌效应蛋白 PemB 的结构特征和潜在脂质相互作用。

Exploring structural features and potential lipid interactions of Pseudomonas aeruginosa type three secretion effector PemB by spectroscopic and calorimetric experiments.

机构信息

Department of Structural Biology and Bioinformatics, CSIR-Indian Institute of Chemical Biology (CSIR-IICB), Kolkata, 700032, India.

Biological Sciences, Academy of Scientific and Innovative Research (AcSIR), 201002, Ghaziabad, India.

出版信息

Protein Sci. 2023 Apr;32(4):e4627. doi: 10.1002/pro.4627.

Abstract

Type Three Secretion System (T3SS) is a sophisticated nano-scale weapon utilized by several gram negative bacteria under stringent spatio-temporal regulation to manipulate and evade host immune systems in order to cause infection. To the best of our knowledge, this present study is the first report where we embark upon characterizing inherent features of native type three secretion effector protein PemB through biophysical techniques. Herein, first, we demonstrate binding affinity of PemB for phosphoinositides through isothermal calorimetric titrations. Second, we shed light on its strong homo-oligomerization propensity in aqueous solution through multiple biophysical methods. Third, we also employ several spectroscopic techniques to delineate its disordered and helical conformation. Lastly, we perform a phylogenetic analysis of this new effector to elucidate evolutionary relationship with other organisms. Taken together, our results shall surely contribute to our existing knowledge of Pseudomonas aeruginosa secretome.

摘要

III 型分泌系统(T3SS)是一种复杂的纳米级武器,几种革兰氏阴性菌在严格的时空调节下利用它来操纵和逃避宿主免疫系统,从而引起感染。据我们所知,本研究首次通过生物物理技术对天然 III 型分泌效应蛋白 PemB 的固有特性进行了表征。在这里,首先,我们通过等温滴定量热法证明了 PemB 与磷酸肌醇的结合亲和力。其次,我们通过多种生物物理方法阐明了它在水溶液中强烈的同型寡聚倾向。第三,我们还使用几种光谱技术来描绘其无规卷曲和螺旋构象。最后,我们对这个新效应物进行了系统发育分析,以阐明与其他生物的进化关系。总之,我们的研究结果必将有助于我们现有的铜绿假单胞菌分泌组学知识。

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