Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore, 117543, Singapore.
State Key Laboratory of Bioactive Substances and Functions of Natural Medicines and Beijing Key Laboratory of Active Substances Discovery and Druggability Evaluation, Institute of Materia Medica Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, 100050, China.
Chemistry. 2023 May 22;29(29):e202300531. doi: 10.1002/chem.202300531. Epub 2023 Apr 5.
Drugs and bioactive natural products exert their pharmacological effects by engaging numerous cellular targets in our body. Identification of these protein targets is essential for understanding the mechanism-of-action of these compounds, thus contributing to improved drug design in drug discovery programs. Termed "in situ drug profiling", a common strategy for studying these bioactive compounds centralized on the covalent capture of protein targets along with a reporter tag to facilitate downstream proteomic analyses. Though highly successful, such reliance on innate electrophilic traps to facilitate covalent capture restricted its applications to covalent acting compounds. Late-stage C-H functionalization (LSF) may resolve this by substituting biologically inert C-H bonds with desired electrophilic groups. Herein, we demonstrated this concept by arming a diverse range of electron-rich aromatic drugs and natural products with α,β-unsaturated esters, via late-stage C-H olefination with an arylthio-based carboxylic acid ligand developed by Ibanez and co-workers. We also showed that covalent probes generated from this LSF approach could be applied for "in situ drug profiling" of Δ -THC, as exemplified by the successful target engagement of α-4 db, a Δ -THC-based probe, to its native target hCB R. In combination with AfBP 7, a photoaffinity-based derivative of Δ -THC, we identified several novel putative targets that could account for some of the effects in THC consumption. We anticipate our C-H LSF strategy to be widely adopted for future studies of non-covalent drugs.
药物和生物活性天然产物通过与体内众多细胞靶标相互作用发挥其药理作用。鉴定这些蛋白质靶标对于了解这些化合物的作用机制至关重要,从而有助于改进药物发现计划中的药物设计。这种被称为“原位药物分析”的方法,是研究这些生物活性化合物的常用策略,其集中于通过共价捕获蛋白靶标以及带有报告标签的试剂,来促进下游蛋白质组学分析。虽然这种方法非常成功,但对固有亲电陷阱的依赖限制了其在共价作用化合物中的应用。晚期 C-H 功能化(LSF)可以通过用所需的亲电基团替代生物惰性的 C-H 键来解决这个问题。在此,我们通过使用 Ibanez 及其同事开发的基于芳基硫代羧酸配体的芳基硫代酯对各种富电子芳香族药物和天然产物进行晚期 C-H 烯烃化,从而证明了这一概念。我们还表明,通过这种 LSF 方法生成的共价探针可用于“原位药物分析”,如用基于 Δ -THC 的探针 α-4 db 成功靶向其天然靶标 hCB R,证明了这一方法的有效性。结合 AfBP 7,一种基于 Δ -THC 的光亲和性衍生物,我们鉴定了几个可能与 THC 消耗相关的新的潜在靶标。我们预计我们的 C-H LSF 策略将被广泛用于未来对非共价药物的研究。