Department of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia; Emory University Winship Cancer Institute, Atlanta, Georgia.
Department of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia.
Lab Invest. 2023 Mar;103(3):100002. doi: 10.1016/j.labinv.2022.100002. Epub 2023 Jan 10.
Resistance to hormone therapy leads to a recurrence of estrogen receptor-positive breast cancer. We have demonstrated that the epithelial splicing regulatory protein 1 (ESRP1) significantly affects cell/tumor growth and metabolism and is associated with a poor prognosis in this breast cancer subtype. In this study, we aimed to investigate the ESRP1 protein-messenger RNA (mRNA) interaction in hormone therapy-resistant breast cancer. RNA-binding protein immunoprecipitation (RIP) followed by Clariom D (Applied Biosystems/Thermo Fisher Scientific) transcriptomics microarray (RIP-Chip) was performed to identify mRNA-binding partners of ESRP1. The integration of RIP-Chip and immunoprecipitation-mass spectrometry analyses identified phosphoglycerate dehydrogenase (PHGDH), a key metabolic enzyme, as a binding partner of ESRP1 in hormone-resistant breast cancer. Bioinformatic analysis showed ESRP1 binding to the 5' untranslated region of PHGDH. RNA electrophoresis mobility shift assay and RIP-quantitative reverse transcription-polymerase chain reaction further validated the ESRP1-PHGDH binding. In addition, knockdown of ESRP1 decreased PHGDH mRNA stability significantly, suggesting the posttranscriptional regulation of PHGDH by ESRP1. The presence or absence of ESRP1 levels significantly affected the stability in tamoxifen-resistant LCC2 and fulvestrant-resistant LCC9 cells. PHGDH knockdown in tamoxifen-resistant cells further reduced the oxygen consumption rate (ranging from P = .005 and P = .02), mimicking the effects of ESRP1 knockdown. Glycolytic parameters were also altered (ranging P = .001 and P = .005). ESRP1 levels did not affect the stability of PHGDH in T-47D cells, although knockdown of PHGDH affected the growth of these cells. In conclusion, to our knowledge, this study, for the first time, reports that ESRP1 binds to the 5' untranslated region of PHGDH, increasing its mRNA stability in hormone therapy-resistant estrogen receptor-positive breast cancer. These findings provide evidence for a novel mechanism of action of RNA-binding proteins such as ESRP1. These new insights could assist in developing novel strategies for the treatment of hormone therapy-resistant breast cancer.
抗激素治疗导致雌激素受体阳性乳腺癌的复发。我们已经证明,上皮剪接调节蛋白 1(ESRP1)显著影响细胞/肿瘤的生长和代谢,并与这种乳腺癌亚型的不良预后相关。在这项研究中,我们旨在研究激素治疗耐药性乳腺癌中 ESRP1 蛋白-messenger RNA(mRNA)的相互作用。进行 RNA 结合蛋白免疫沉淀(RIP),随后进行 Clariom D(Applied Biosystems/Thermo Fisher Scientific)转录组微阵列(RIP-Chip),以鉴定 ESRP1 的 mRNA 结合伙伴。RIP-Chip 和免疫沉淀-质谱分析的整合鉴定出磷酸甘油酸脱氢酶(PHGDH),一种关键的代谢酶,是激素耐药性乳腺癌中 ESRP1 的结合伙伴。生物信息学分析显示 ESRP1 结合 PHGDH 的 5'非翻译区。RNA 电泳迁移率变动分析和 RIP 定量逆转录聚合酶链反应进一步验证了 ESRP1-PHGDH 的结合。此外,ESRP1 的敲低显著降低了 PHGDH mRNA 的稳定性,表明 ESRP1 对 PHGDH 的转录后调节。ESRP1 水平的存在与否显著影响他莫昔芬耐药性 LCC2 和氟维司群耐药性 LCC9 细胞中的稳定性。在他莫昔芬耐药性细胞中敲低 PHGDH 进一步降低了耗氧率(范围从 P=0.005 到 P=0.02),模拟了 ESRP1 敲低的影响。糖酵解参数也发生改变(范围 P=0.001 和 P=0.005)。ESRP1 水平不影响 T-47D 细胞中 PHGDH 的稳定性,尽管 PHGDH 的敲低影响了这些细胞的生长。总之,据我们所知,这项研究首次报道 ESRP1 结合 PHGDH 的 5'非翻译区,增加了激素治疗耐药性雌激素受体阳性乳腺癌中 PHGDH 的 mRNA 稳定性。这些发现为 ESRP1 等 RNA 结合蛋白的作用提供了新的证据。这些新的见解可以帮助开发治疗激素治疗耐药性乳腺癌的新策略。