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来自恶臭假单胞菌DSM 6986 的水杨酸 1,2-双加氧酶是一种双功能酶,通过一种新的酰胺水解酶活性使真菌毒素赭曲霉素 A 失活。

The salicylate 1,2-dioxygenase from Pseudaminobacter salicylatoxidans DSM 6986 is a bifunctional enzyme that inactivates the mycotoxin ochratoxin A by a novel amidohydrolase activity.

机构信息

Institute of Food Science, Technology and Nutrition (ICTAN), CSIC, José Antonio Novais 6, 28040 Madrid, Spain.

Department of Crystallography and Structural Biology, Institute of Physical Chemistry Rocasolano, CSIC, Serrano 119, 28006 Madrid, Spain.

出版信息

Int J Biol Macromol. 2023 May 15;237:124230. doi: 10.1016/j.ijbiomac.2023.124230. Epub 2023 Mar 28.

Abstract

The salicylate 1,2-dioxygenase from the bacterium Pseudaminobacter salicylatoxidans DSM 6986 (PsSDO) is a versatile metalloenzyme that participates in the aerobic biodegradation of aromatic compounds, such as gentisates and salicylates. Surprisingly, and unrelated to this metabolic role, it has been reported that PsSDO may transform the mycotoxin ochratoxin A (OTA), a molecule that appears in numerous food products that results in serious biotechnological concern. In this work, we show that PsSDO, together with its dioxygenase activity, behaves as an amidohydrolase with a marked specificity for substrates containing a C-terminal phenylalanine residue, similar to OTA, although its presence is not an absolute requirement. This side chain would establish aromatic stacking interactions with the indole ring of Trp104. PsSDO hydrolysed the amide bond of OTA rendering the much less toxic ochratoxin α and L-β-phenylalanine. The binding mode of OTA and of a diverse set of synthetic carboxypeptidase substrates these substrates have been characterized by molecular docking simulations, which has permitted us to propose a catalytic mechanism of hydrolysis by PsSDO that, similarly to metallocarboxypeptidases, assumes a water-induced pathway following a general acid/base mechanism in which the side chain of Glu82 would provide the solvent nucleophilicity required for the enzymatic reaction. Since the PsSDO chromosomal region, absent in other Pseudaminobacter strains, contained a set of genes present in conjugative plasmids, it could have been acquired by horizontal gene transfer, probably from a Celeribacter strain.

摘要

来自假单胞菌属细菌 Pseudaminobacter salicylatoxidans DSM 6986(PsSDO)的水杨酸 1,2-双加氧酶是一种多功能金属酶,参与芳香族化合物(如龙胆酸盐和水杨酸)的需氧生物降解。令人惊讶的是,与这种代谢作用无关,据报道 PsSDO 可能会转化真菌毒素赭曲霉毒素 A(OTA),OTA 存在于许多食品中,这会引起严重的生物技术关注。在这项工作中,我们表明 PsSDO 与其双加氧酶活性一起,表现出对含有 C 末端苯丙氨酸残基的底物具有明显特异性的酰胺水解酶,类似于 OTA,尽管其存在不是绝对要求。这种侧链将与色氨酸 104 的吲哚环建立芳香堆积相互作用。PsSDO 水解 OTA 的酰胺键,生成毒性较小的赭曲霉毒素 α 和 L-β-苯丙氨酸。通过分子对接模拟对 OTA 和一系列不同的合成羧肽酶底物的结合模式进行了表征,这使我们能够提出 PsSDO 水解的催化机制,类似于金属羧肽酶,假设在一般酸碱机制下,水诱导途径,其中 Glu82 的侧链将提供酶反应所需的溶剂亲核性。由于 PsSDO 染色体区域在其他假单胞菌菌株中不存在,包含了一组存在于可移动质粒中的基因,它可能是通过水平基因转移获得的,可能来自 Celeribacter 菌株。

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