Suppr超能文献

一项全面的泛癌分析揭示了植物同源结构域指蛋白14(PHF14)在人类肿瘤中的致癌作用。

A comprehensive pan-cancer analysis unveiling the oncogenic effect of plant homeodomain finger protein 14 (PHF14) in human tumors.

作者信息

Cao Zhiyou, Zhan Haibo, Wu Weiwei, Kuang Zhihui, Mo Fengbo, Liu Xuqiang, Dai Min

机构信息

Department of Orthopedics, The First Affiliated Hospital of Nanchang University, Nanchang, Jiangxi, China.

Artificial Joints Engineering and Technology Research Center of Jiangxi Province, Nanchang, Jiangxi, China.

出版信息

Front Genet. 2023 Mar 10;14:1073138. doi: 10.3389/fgene.2023.1073138. eCollection 2023.

Abstract

The plant homeodomain (PHD) finger refers to a protein motif that plays a key role in the recognition and translation of histone modification marks by promoting gene transcriptional activation and silencing. As an important member of the PHD family, the plant homeodomain finger protein 14 (PHF14) affects the biological behavior of cells as a regulatory factor. Several emerging studies have demonstrated that PHF14 expression is closely associated with the development of some cancers, but there is still no feasible pan-cancer analysis. Based on existing datasets from the Cancer Genome Atlas (TCGA) and the Gene Expression Omnibus (GEO), we performed a systematic analysis of the oncogenic role of the PHF14 gene in 33 human cancers. The expression level of PHF14 was significantly different between different types of tumors and adjacent normal tissues, and the expression or genetic alteration of PHF14 gene was closely related to the prognosis of most cancer patients. Levels of cancer-associated fibroblasts (CAFs) infiltration in various cancer types were also observed to correlate with PHF14 expression. In some tumors, PFH14 may play a role in tumor immunity by regulating the expression levels of immune checkpoint genes. In addition, the results of enrichment analysis showed that the main biological activities of PHF14 were related to various signaling pathways or chromatin complex effects. In conclusion, our pan-cancer research shows that the expression level of PHF14 is closely related to the carcinogenesis and prognosis of certain tumors, which needs to be further verified by more experiments and more in-depth mechanism exploration.

摘要

植物同源结构域(PHD)指状结构是一种蛋白质基序,通过促进基因转录激活和沉默,在组蛋白修饰标记的识别和转导中起关键作用。作为PHD家族的重要成员,植物同源结构域指状蛋白14(PHF14)作为一种调节因子影响细胞的生物学行为。几项新出现的研究表明,PHF14的表达与某些癌症的发生密切相关,但目前仍缺乏可行的泛癌分析。基于癌症基因组图谱(TCGA)和基因表达综合数据库(GEO)的现有数据集,我们对PHF14基因在33种人类癌症中的致癌作用进行了系统分析。PHF14在不同类型肿瘤与邻近正常组织中的表达水平存在显著差异,且PHF14基因的表达或基因改变与大多数癌症患者的预后密切相关。还观察到不同癌症类型中癌症相关成纤维细胞(CAF)的浸润水平与PHF14表达相关。在某些肿瘤中,PFH14可能通过调节免疫检查点基因的表达水平在肿瘤免疫中发挥作用。此外,富集分析结果表明,PHF14的主要生物学活性与各种信号通路或染色质复合体效应有关。总之,我们的泛癌研究表明,PHF14的表达水平与某些肿瘤的发生和预后密切相关,这需要通过更多实验和更深入的机制探索来进一步验证。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a26/10061232/81a57cf5a8fa/fgene-14-1073138-g001.jpg

相似文献

1
A comprehensive pan-cancer analysis unveiling the oncogenic effect of plant homeodomain finger protein 14 (PHF14) in human tumors.
Front Genet. 2023 Mar 10;14:1073138. doi: 10.3389/fgene.2023.1073138. eCollection 2023.
2
Depletion of PHF14, a novel histone-binding protein gene, causes neonatal lethality in mice due to respiratory failure.
Acta Biochim Biophys Sin (Shanghai). 2013 Aug;45(8):622-33. doi: 10.1093/abbs/gmt055. Epub 2013 May 20.
5
6
Aberrant expression of the gene in biliary tract cancer cells.
Oncol Lett. 2013 Jun;5(6):1849-1853. doi: 10.3892/ol.2013.1278. Epub 2013 Mar 29.
7
PHF14 knockdown causes apoptosis by inducing DNA damage and impairing the activity of the damage response complex in colorectal cancer.
Cancer Lett. 2022 Apr 10;531:109-123. doi: 10.1016/j.canlet.2022.01.002. Epub 2022 Jan 21.
8
An integrative pan-cancer analysis reveals the oncogenic role of mutS homolog 6 (MSH6) in human tumors.
Aging (Albany NY). 2021 Dec 7;13(23):25271-25290. doi: 10.18632/aging.203745.

引用本文的文献

1
A sequencing-based screening method identifies regulators of EGFR signaling from nonviable mutants in .
Sci Signal. 2025 Feb 25;18(875):eadp9377. doi: 10.1126/scisignal.adp9377.
2
Deciphering the dual roles of PHD finger proteins from oncogenic drivers to tumor suppressors.
Front Cell Dev Biol. 2024 May 15;12:1403396. doi: 10.3389/fcell.2024.1403396. eCollection 2024.

本文引用的文献

1
PHF14 knockdown causes apoptosis by inducing DNA damage and impairing the activity of the damage response complex in colorectal cancer.
Cancer Lett. 2022 Apr 10;531:109-123. doi: 10.1016/j.canlet.2022.01.002. Epub 2022 Jan 21.
2
Molecular basis for bipartite recognition of histone H3 by the PZP domain of PHF14.
Nucleic Acids Res. 2021 Sep 7;49(15):8961-8973. doi: 10.1093/nar/gkab670.
3
PHF19 activates hedgehog signaling and promotes tumorigenesis in hepatocellular carcinoma.
Exp Cell Res. 2021 Sep 1;406(1):112690. doi: 10.1016/j.yexcr.2021.112690. Epub 2021 Jun 12.
4
Histone demethylase PHF8 drives neuroendocrine prostate cancer progression by epigenetically upregulating FOXA2.
J Pathol. 2021 Jan;253(1):106-118. doi: 10.1002/path.5557. Epub 2020 Nov 5.
5
PHF14 Promotes Cell Proliferation and Migration through the AKT and ERK1/2 Pathways in Gastric Cancer Cells.
Biomed Res Int. 2020 Jun 10;2020:6507510. doi: 10.1155/2020/6507510. eCollection 2020.
6
A framework for advancing our understanding of cancer-associated fibroblasts.
Nat Rev Cancer. 2020 Mar;20(3):174-186. doi: 10.1038/s41568-019-0238-1. Epub 2020 Jan 24.
7
8
Immune checkpoint inhibitors: a promising anticancer therapy.
Drug Discov Today. 2020 Jan;25(1):223-229. doi: 10.1016/j.drudis.2019.11.003. Epub 2019 Nov 15.
9
Immune checkpoint inhibitors: The linchpins of modern immunotherapy.
Immunol Rev. 2019 Jul;290(1):6-23. doi: 10.1111/imr.12766.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验