From the National Clinical Research Center for Obstetric & Gynecologic Diseases, Department of Obstetrics and Gynecology, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China.
Department of Laboratory Medicine, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China.
Menopause. 2023 Jun 1;30(6):621-628. doi: 10.1097/GME.0000000000002182. Epub 2023 Apr 11.
Both environmental and genetic risk factors contribute to pelvic organ prolapse (POP). No genome-wide study has investigated the gene-environment (G × E) interactions. In this study, we aim to identify single nucleotide polymorphisms (SNPs) that may interact with the potential environmental factors, maximum birth weight, and age in Chinese women.
We recruited 576 women for phase 1 and 264 women for phase 2 with stages III and IV prolapse from six geographic regions of China. Genomic DNAs from blood samples were genotyped using Affymetrix Axiom Genome-Wide CHB1 Array of 640,674 SNPs for phase 1 and Illumina Infinium Asian Screening Array of 743,722 SNPs for phase 2. Meta-analysis was used to combine the two results. Interactions of genetic variants with maximum birth weight and age on POP severity were identified.
In phase 1, 502,283 SNPs in 523 women passed quality control and 450 women had complete POP-quantification measurements. In phase 2, 463,351 SNPs in 257 women passed quality control with complete POP-quantification measurements. Three SNPs rs76662748 ( WDR59 , Pmeta = 2.146 × 10 -8 ), rs149541061 ( 3p26.1 , Pmeta = 9.273 × 10 -9 ), and rs34503674 ( DOCK9 , Pmeta = 1.778 × 10 -9 ) respectively interacted with maximum birth weight, and two SNPs rs74065743 ( LINC01343 , Pmeta = 4.386 × 10 -8 ) and rs322376 ( NEURL1B - DUSP1 , Pmeta = 2.263 × 10 -8 ), respectively, interacted with age. The magnitude of disease severity associated with maximum birth weight and age differed according to genetic variants.
This study provided preliminary evidence that interactions between genetic variants and environmental risk factors are associated with POP severity, suggesting the potential use of combining epidemiologic exposure data with selected genotyping for risk assessment and patient stratification.
环境和遗传风险因素都可能导致盆腔器官脱垂(POP)。目前尚无全基因组研究调查基因-环境(G×E)相互作用。本研究旨在鉴定可能与中国女性潜在环境因素(最大出生体重和年龄)相互作用的单核苷酸多态性(SNP)。
我们从中国六个地理区域招募了 576 名 III 期和 IV 期脱垂患者(第 1 阶段)和 264 名患者(第 2 阶段)。使用 Affymetrix Axiom Genome-Wide CHB1 Array 对 640674 个 SNP 进行第 1 阶段的基因分型,使用 Illumina Infinium Asian Screening Array 对 743722 个 SNP 进行第 2 阶段的基因分型。Meta 分析用于合并两个结果。鉴定了遗传变异与最大出生体重和年龄对 POP 严重程度的相互作用。
第 1 阶段,523 名女性中有 502283 个 SNP 通过质量控制,450 名女性有完整的 POP 量化测量值。第 2 阶段,257 名女性中有 463351 个 SNP 通过质量控制,并且有完整的 POP 量化测量值。三个 SNP(rs76662748(WDR59,Pmeta=2.146×10-8)、rs149541061(3p26.1,Pmeta=9.273×10-9)和 rs34503674(DOCK9,Pmeta=1.778×10-9)分别与最大出生体重相互作用,两个 SNP(rs74065743(LINC01343,Pmeta=4.386×10-8)和 rs322376(NEURL1B-DUSP1,Pmeta=2.263×10-8)分别与年龄相互作用。与遗传变异相关的疾病严重程度与最大出生体重和年龄有关。
本研究初步表明,遗传变异与环境危险因素之间的相互作用与 POP 严重程度相关,提示将流行病学暴露数据与选定的基因分型相结合用于风险评估和患者分层的潜在用途。