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特定对映体醛抑制木瓜蛋白酶时形成的硫代半缩醛立体特异性的 13C 核磁共振研究。

13C NMR study of the stereospecificity of the thiohemiacetals formed on inhibition of papain by specific enantiomeric aldehydes.

作者信息

Mackenzie N E, Grant S K, Scott A I, Malthouse J P

出版信息

Biochemistry. 1986 Apr 22;25(8):2293-8. doi: 10.1021/bi00356a066.

DOI:10.1021/bi00356a066
PMID:3707946
Abstract

The inhibition of papain by N-acetyl-D- and N-acetyl-L-phenylalanyl[1-13C]glycinal was investigated by 13C nuclear magnetic resonance (NMR) spectroscopy. Both the L- and D-aldehyde enantiomers formed thiohemiacetals with papain. The 13C-enriched carbon of the thiohemiacetals formed with the L- and D-aldehydes has chemical shifts at 74.7 and 75.1 ppm, respectively. The difference in chemical shift for the two inhibitor complexes is attributed to each forming a different diastereomeric papain thiohemiacetal. Each enantiomeric inhibitor formed two diastereomeric thiohemiacetals with chiral thiols but produced a single diastereoisomer with papain. It is concluded that with papain thiohemiacetal formation is stereospecific. The D inhibitor is bound only 5-fold less tightly than the L inhibitor, which suggests that in both these inhibitor complexes the phenyl ring of the inhibitor phenylalanine is bound at the S2 hydrophobic pocket of papain. This is supported by computer modeling studies that show that both the N-acetyl-D- and N-acetyl-L-phenylalanine moieties can be separately fitted into the S2 subsite with the phenyl ring of phenylalanine in the S2 hydrophobic pocket. It is concluded that thiohemiacetal formation at S1 (S1 and S1' are the active center amino acid binding sites) is stereospecific with both D and L inhibitors. Computer modeling studies support this showing that, due to steric hindrance between the thiohemiacetal hydroxyl group and the backbone amide nitrogen of serine-24, only one of the two possible thiohemiacetal enantiomers can be formed at the S1 subsite. The thiohemiacetals formed from both the D- and L-aldehyde inhibitors therefore have only one permitted conformation at S1.(ABSTRACT TRUNCATED AT 250 WORDS)

摘要

通过碳-13核磁共振(NMR)光谱研究了N-乙酰-D-和N-乙酰-L-苯丙氨酰基[1-13C]甘氨醛对木瓜蛋白酶的抑制作用。L-和D-醛对映体均与木瓜蛋白酶形成硫代半缩醛。与L-和D-醛形成的硫代半缩醛中富含碳-13的碳的化学位移分别为74.7和75.1 ppm。两种抑制剂复合物化学位移的差异归因于它们各自形成了不同的非对映异构的木瓜蛋白酶硫代半缩醛。每种对映体抑制剂与手性硫醇形成两种非对映异构的硫代半缩醛,但与木瓜蛋白酶只产生一种非对映异构体。得出的结论是,木瓜蛋白酶形成硫代半缩醛具有立体特异性。D抑制剂的结合紧密度仅比L抑制剂低5倍,这表明在这两种抑制剂复合物中,抑制剂苯丙氨酸的苯环都结合在木瓜蛋白酶的S2疏水口袋中。计算机模拟研究支持了这一点,该研究表明N-乙酰-D-和N-乙酰-L-苯丙氨酸部分都可以分别与苯丙氨酸的苯环位于S2疏水疏水疏水点位于S2疏水口袋中。得出的结论是,在S1(S1和S1'是活性中心氨基酸结合位点)处形成硫代半缩醛对D和L抑制剂均具有立体特异性。计算机模拟研究支持了这一点,表明由于硫代半缩醛羟基与丝氨酸-24的主链酰胺氮之间的空间位阻,在S1亚位点只能形成两种可能的硫代半缩醛对映体中的一种。因此,由D-和L-醛抑制剂形成的硫代半缩醛在S1处只有一种允许的构象。(摘要截短至250字)

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