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圈养、再引入和两栖动物相关细菌群落的再野生化。

Captivity, Reintroductions, and the Rewilding of Amphibian-associated Bacterial Communities.

机构信息

Dept. of Ecology and Evolutionary Biology, University of Colorado Boulder, Boulder, CO, 80309, USA.

United States Geological Survey, Fort Collins Science Center, 2150 Centre Ave. Bldg C, Fort Collins, CO, 80526, USA.

出版信息

Microb Ecol. 2023 Nov;86(4):2271-2281. doi: 10.1007/s00248-023-02229-3. Epub 2023 May 24.

DOI:10.1007/s00248-023-02229-3
PMID:37222806
Abstract

Many studies have noted differences in microbes associated with animals reared in captivity compared to their wild counterparts, but few studies have examined how microbes change when animals are reintroduced to the wild after captive rearing. As captive assurance populations and reintroduction programs increase, a better understanding of how microbial symbionts respond during animal translocations is critical. We examined changes in microbes associated with boreal toads (Anaxyrus boreas), a threatened amphibian, after reintroduction to the wild following captive rearing. Previous studies demonstrate that developmental life stage is an important factor in amphibian microbiomes. We collected 16S marker-gene sequencing datasets to investigate: (i) comparisons of the skin, mouth, and fecal bacteria of boreal toads across four developmental life stages in captivity and the wild, (ii) tadpole skin bacteria before and after reintroduction to the wild, and (iii) adult skin bacteria during reintroduction to the wild. We demonstrated that differences occur across skin, fecal, and mouth bacterial communities in captive versus wild boreal toads, and that the degree of difference depends on developmental stage. Skin bacterial communities from captive tadpoles were more similar to their wild counterparts than captive post-metamorphic individuals were to their wild counterparts. When captive-reared tadpoles were introduced to a wild site, their skin bacteria changed rapidly to resemble wild tadpoles. Similarly, the skin bacterial communities of reintroduced adult boreal toads also shifted to resemble those of wild toads. Our results indicate that a clear microbial signature of captivity in amphibians does not persist after release into natural habitat.

摘要

许多研究都注意到了在圈养动物与野生动物相比,其相关微生物存在差异,但很少有研究探讨过当动物在圈养后被重新引入野外时,微生物是如何变化的。随着圈养保证种群和再引进计划的增加,更好地了解微生物共生体在动物转移过程中的反应至关重要。我们研究了在圈养后重新引入野外的北方牛蛙(Anaxyrus boreas),一种受威胁的两栖动物,其相关微生物的变化。先前的研究表明,发育阶段是两栖动物微生物组的一个重要因素。我们收集了 16S 标记基因测序数据集,以调查:(i)在圈养和野外的四个发育阶段比较北方牛蛙的皮肤、口腔和粪便细菌,(ii)在重新引入野外之前和之后的蝌蚪皮肤细菌,以及(iii)在重新引入野外期间的成年皮肤细菌。我们表明,在圈养和野外的北方牛蛙的皮肤、粪便和口腔细菌群落中存在差异,而且差异的程度取决于发育阶段。来自圈养蝌蚪的皮肤细菌群落与其野生对应物更相似,而圈养后变态个体与其野生对应物则不相似。当圈养的蝌蚪被引入野外时,它们的皮肤细菌迅速变化,变得与野生蝌蚪相似。同样,重新引入的成年北方牛蛙的皮肤细菌群落也向野生牛蛙的特征转变。我们的结果表明,在两栖动物中,圈养的明显微生物特征在释放到自然栖息地后不会持续存在。

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Environ Microbiol. 2021 Aug;23(8):4595-4611. doi: 10.1111/1462-2920.15653. Epub 2021 Jul 13.
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Looking like the locals - gut microbiome changes post-release in an endangered species.形似当地人——濒危物种放归后肠道微生物群的变化
Anim Microbiome. 2019 Oct 3;1(1):8. doi: 10.1186/s42523-019-0012-4.
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Effects of captivity, diet, and relocation on the gut bacterial communities of white-footed mice.
圈养、饮食及迁移对白足鼠肠道细菌群落的影响。
Ecol Evol. 2020 Apr 3;10(11):4677-4690. doi: 10.1002/ece3.6221. eCollection 2020 Jun.
4
Captivity and Infection by the Fungal Pathogen Perturb the Amphibian Skin Microbiome.被真菌病原体感染和圈养会扰乱两栖动物的皮肤微生物群。
Front Microbiol. 2019 Aug 23;10:1834. doi: 10.3389/fmicb.2019.01834. eCollection 2019.
5
Conservation biology needs a microbial renaissance: a call for the consideration of host-associated microbiota in wildlife management practices.保护生物学需要迎来一场微生物学的复兴:呼吁在野生动物管理实践中考虑与宿主相关的微生物群。
Proc Biol Sci. 2019 Jan 30;286(1895):20182448. doi: 10.1098/rspb.2018.2448.
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Amphibian fungal panzootic causes catastrophic and ongoing loss of biodiversity.两栖动物真菌泛发性疾病导致生物多样性灾难性且持续丧失。
Science. 2019 Mar 29;363(6434):1459-1463. doi: 10.1126/science.aav0379.
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Community richness of amphibian skin bacteria correlates with bioclimate at the global scale.全球范围内,两栖动物皮肤细菌的群落丰富度与生物气候有关。
Nat Ecol Evol. 2019 Mar;3(3):381-389. doi: 10.1038/s41559-019-0798-1. Epub 2019 Feb 18.
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Effects of the captive and wild environment on diversity of the gut microbiome of deer mice (Peromyscus maniculatus).圈养和野生环境对鹿鼠(Peromyscus maniculatus)肠道微生物组多样性的影响。
ISME J. 2019 May;13(5):1293-1305. doi: 10.1038/s41396-019-0345-8. Epub 2019 Jan 21.
9
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PLoS One. 2018 Oct 31;13(10):e0205652. doi: 10.1371/journal.pone.0205652. eCollection 2018.
10
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Microb Ecol. 2019 Apr;77(3):782-793. doi: 10.1007/s00248-018-1258-1. Epub 2018 Sep 12.