State Key Laboratory of Natural and Biomimetic Drugs, Chemical Biology Center, Department of Molecular and Cellular Pharmacology, Pharmaceutical Sciences, Peking University, Beijing, China.
Methods Mol Biol. 2023;2676:87-100. doi: 10.1007/978-1-0716-3251-2_6.
Natural proteins are normally made by 20 canonical amino acids. Genetic code expansion (GCE) enables incorporation of diverse chemically synthesized noncanonical amino acids (ncAAs) by orthogonal aminoacyl-tRNA synthetase (aaRS)/tRNA pairs using nonsense codons, which could significantly expand new functionalities of proteins in both scientific and biomedical applications. Here, by hijacking the cysteine biosynthetic enzymes, we describe a method combining amino acid biosynthesis and GCE to introduce around 50 structurally novel ncAAs into proteins by supplementation of commercially available aromatic thiol precursors, thus eliminating the need to chemically synthesize these ncAAs. A screening method is also provided for improving the incorporation efficiency of a particular ncAA. Furthermore, we demonstrate bioorthogonal groups, such as azide and ketone, that are compatible with our system and can be easily introduced into protein for subsequent site-specific labeling.
天然蛋白质通常由 20 种标准氨基酸组成。遗传密码扩展(GCE)通过正交氨酰-tRNA 合成酶(aaRS)/tRNA 对利用无意义密码子使各种化学合成的非标准氨基酸(ncAA)掺入,这可以显著扩展蛋白质在科学和生物医学应用中的新功能。在这里,我们通过劫持半胱氨酸生物合成酶,描述了一种将氨基酸生物合成和 GCE 结合的方法,通过补充商业上可用的芳香硫醇前体,将大约 50 种结构新颖的 ncAA 引入蛋白质中,从而无需化学合成这些 ncAA。还提供了一种筛选方法来提高特定 ncAA 的掺入效率。此外,我们还证明了与我们的系统兼容的生物正交基团,如叠氮化物和酮,可以很容易地引入蛋白质中,用于随后的位点特异性标记。