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在产油酸的谷氨酸棒杆菌菌株中进行代谢工程以生产棕榈酸或棕榈油酸。

Metabolic engineering to produce palmitic acid or palmitoleic acid in an oleic acid-producing Corynebacterium glutamicum strain.

机构信息

Department of Agricultural and Life Sciences, Faculty of Agriculture, Shinshu University, Nagano, Japan.

Bioprocess Development Center, Kyowa Hakko Bio Co., Ltd., Tsukuba, Ibaraki, Japan.

出版信息

Metab Eng. 2023 Jul;78:148-158. doi: 10.1016/j.ymben.2023.06.002. Epub 2023 Jun 5.

Abstract

Focusing on the differences in the catalytic properties of two type I fatty acid synthases FasA and FasB, the fasA gene was disrupted in an oleic acid-producing Corynebacterium glutamicum strain. The resulting oleic acid-requiring strain whose fatty acid synthesis depends only on FasB exhibited almost exclusive production (217 mg/L) of palmitic acid (C16:0) from 1% glucose under the conditions supplemented with the minimum concentration of sodium oleate for growth. Plasmid-mediated amplification of fasB led to a 1.47-fold increase in palmitic acid production (320 mg/L), while fasB disruption resulted in no fatty acid production, with excretion of malonic acid (30 mg/L). Next, aiming at conversion of the palmitic acid producer to a producer of palmitoleic acid (POA, C16:1Δ9), we introduced the Pseudomonas nitroreducens Δ9-desaturase genes desBC into the palmitic acid producer. Although this resulted in failure, we noticed the emergence of suppressor mutants that exhibited the oleic acid-non-requiring phenotype. Production experiments revealed that one such mutant M-1 undoubtedly produced POA (17 mg/L) together with palmitic acid (173 mg/L). Whole genomic analysis and subsequent genetic analysis identified the suppressor mutation of strain M-1 as a loss-of-function mutation for the DtxR protein, a global regulator of iron metabolism. Considering that DesBC are both iron-containing enzymes, we investigated the conditions for increased iron availability to improve the DesBC-dependent conversion ratio of palmitic acid to POA. Eventually, supplementation of both hemin and the iron chelator protocatechuic acid in the engineered strain dramatically enhanced POA production to 161 mg/L with a conversion ratio of 80.1%. Cellular fatty acid analysis revealed that the POA-producing cells were really equipped with unnatural membrane lipids comprised predominantly of palmitic acid (85.1% of total cellular fatty acids), followed by non-native POA (12.4%).

摘要

针对两种类型 I 脂肪酸合酶 FasA 和 FasB 的催化特性差异,我们在产油酸谷氨酸棒杆菌中敲除 fasA 基因。结果表明,油酸需求型菌株的脂肪酸合成仅依赖 FasB,在补充最低浓度油酸钠以促进生长的条件下,几乎只从 1%葡萄糖中产生(217mg/L)棕榈酸(C16:0)。质粒介导 fasB 的扩增导致棕榈酸产量增加 1.47 倍(320mg/L),而 fasB 敲除则导致没有脂肪酸产生,同时排出丙二酸(30mg/L)。接下来,我们旨在将棕榈酸生产菌转化为棕榈油酸(POA,C16:1Δ9)生产菌,我们将 Pseudomonas nitroreducens Δ9-去饱和酶基因 desBC 引入棕榈酸生产菌。虽然这导致了失败,但我们注意到出现了具有油酸非需求表型的抑制突变体。生产实验表明,其中一个突变体 M-1 无疑同时产生了 POA(17mg/L)和棕榈酸(173mg/L)。全基因组分析和随后的遗传分析确定了突变体 M-1 的抑制突变是 DtxR 蛋白的功能丧失突变,DtxR 蛋白是铁代谢的全局调节因子。考虑到 DesBC 都是含铁酶,我们研究了增加铁可用性的条件,以提高 DesBC 依赖的棕榈酸转化为 POA 的转化率。最终,在工程菌株中补充血红素和铁螯合剂原儿茶酸,可显著提高 POA 产量至 161mg/L,转化率为 80.1%。细胞脂肪酸分析表明,POA 生产细胞确实配备了由棕榈酸(总细胞脂肪酸的 85.1%)和非天然 POA(12.4%)组成的非天然膜脂。

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