Program in Chemical Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts 01605, United States.
Department of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medial School, Worcester, Massachusetts 01605, United States.
Biochemistry. 2023 Jul 4;62(13):2065-2078. doi: 10.1021/acs.biochem.3c00081. Epub 2023 Jun 12.
Sterile alpha and toll/interleukin receptor (TIR) motif containing protein 1 (SARM1) is an NAD hydrolase and cyclase involved in axonal degeneration. In addition to NAD hydrolysis and cyclization, SARM1 catalyzes a base exchange reaction between nicotinic acid (NA) and NADP to generate NAADP, which is a potent calcium signaling molecule. Herein, we describe efforts to characterize the hydrolysis, cyclization, and base exchange activities of TIR-1, the ortholog of SARM1; TIR-1 also catalyzes NAD(P) hydrolysis and/or cyclization and regulates axonal degeneration in worms. We show that the catalytic domain of TIR-1 undergoes a liquid-to-solid phase transition that regulates not only the hydrolysis and cyclization reactions but also the base exchange reaction. We define the substrate specificities of the reactions, demonstrate that cyclization and base exchange reactions occur within the same pH range, and establish that TIR-1 uses a ternary complex mechanism. Overall, our findings will aid drug discovery efforts and provide insight into the mechanism of recently described inhibitors.
无菌α 和 Toll/白细胞介素受体(TIR)结构域包含蛋白 1(SARM1)是一种 NAD 水解酶和环化酶,参与轴突变性。除了 NAD 水解和环化,SARM1 还催化烟酸(NA)和 NADP 之间的碱基交换反应,生成 NAADP,这是一种有效的钙信号分子。在此,我们描述了对 SARM1 同源物 TIR-1 的水解、环化和碱基交换活性进行表征的努力;TIR-1 还催化 NAD(P)水解和/或环化,并调节线虫中的轴突变性。我们表明,TIR-1 的催化结构域经历了从液相到固相的转变,这不仅调节了水解和环化反应,还调节了碱基交换反应。我们定义了反应的底物特异性,证明了环化和碱基交换反应发生在相同的 pH 范围内,并确定了 TIR-1 使用三元复合物机制。总的来说,我们的发现将有助于药物发现工作,并为最近描述的抑制剂的机制提供深入了解。