Soejima Mikiko, Koda Yoshiro
Department of Forensic Medicine, Kurume University School of Medicine, Kurume 830-0011, Japan.
Diagnostics (Basel). 2023 Jun 10;13(12):2022. doi: 10.3390/diagnostics13122022.
α(1,2)fucosyltransferase (Se enzyme) encoded by is involved in the secretor status of ABH(O) blood group antigens. The allele is one of the non-functional () alleles in which 9.3 kb, containing the entire coding region of , is deleted by -mediated nonhomologous recombination. In addition to this allele, three SNPs of , c.375A>G, c.385A>T, and c.571C>T, appear to be prevalent in certain Oceanian populations such as Polynesians. Recently, we developed an endpoint genotyping assay to determine zygosity, using a FAM-labeled probe for detection of the allele and a VIC-labeled probe for the detection of . In this study, instead of the VIC probe, a HEX-labeled probe covering both c.375A>G and c.385A>T and a Cy5-labeled probe covering c.571C>T were added to the allele assay mixture to allow for the simultaneous detection of these four variations via endpoint genotyping for zygosity and fluorescence melting curve analysis for c.375A>G, c.385A>T, and c.571C>T genotyping. The results obtained from 24 Samoan subjects using this method were identical to those obtained using previous methods. Therefore, it appears that the present method can accurately determine these four variations simultaneously.
由 编码的α(1,2)岩藻糖基转移酶(Se 酶)参与 ABH(O)血型抗原的分泌者状态。 等位基因是无功能的 ()等位基因之一,其中包含 的整个编码区的 9.3 kb 通过 介导的非同源重组被删除。除了这个等位基因外, 的三个单核苷酸多态性,即 c.375A>G、c.385A>T 和 c.571C>T,在某些大洋洲人群如波利尼西亚人中似乎很普遍。最近,我们开发了一种终点基因分型检测方法来确定 的纯合性,使用一个 FAM 标记的探针检测 等位基因,一个 VIC 标记的探针检测 。在本研究中,在 等位基因检测混合物中,用一个覆盖 c.375A>G 和 c.385A>T 的 HEX 标记探针以及一个覆盖 c.571C>T 的 Cy5 标记探针代替 VIC 探针,以便通过终点基因分型确定 的纯合性以及通过荧光熔解曲线分析对 c.375A>G、c.385A>T 和 c.571C>T 进行基因分型,从而同时检测这四个变异。使用该方法从 24 名萨摩亚受试者获得的结果与使用先前方法获得的结果相同。因此,本方法似乎可以同时准确地确定这四个变异。