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成纤维细胞中核纤层蛋白 A/C 转录变体诱导的差异基因表达特征和细胞信号通路。

Differential Gene Expression Signatures and Cellular Signaling Pathways induced by Lamin A/C Transcript Variants in MCF7 Cell Line.

机构信息

Department of Biochemistry and Molecular Medicine, College of Medicine, Alfaisal University, 11533 Riyadh, Saudi Arabia.

Interdisciplinary Nanotechnology Centre, Faculty of Engineering and Technology, Aligarh Muslim University, Aligarh, UP 202002, India.

出版信息

Front Biosci (Landmark Ed). 2023 Jun 12;28(6):113. doi: 10.31083/j.fbl2806113.

Abstract

BACKGROUND

Lamins are the major component of nuclear lamina. Alternative splicing of the 12 exons comprising gene creates five known transcript variants, lamin A, lamin C, lamin AΔ10, lamin AΔ50, and lamin C2. The main objective for this study was to examine the association of critical pathways, networks, molecular and cellular functions regulated by each Lamin A/C transcript variants.

METHODS

Ion AmpliSeq Transcriptome Human Gene Expression analysis was performed on MCF7 cells stably transfected with lamin A/C transcript variants.

RESULTS

Lamin A or lamin AΔ50 upregulation was associated with activation of cell death and inactivation of carcinogenesis while both lamin C or lamin AΔ10 upregulation activated carcinogenesis and cell death.

CONCLUSIONS

Data suggest anti-apoptotic and anti-senescence effects of lamin C and lamin AΔ10 as several functions, including apoptosis and necrosis functions are inactivated following lamin C or lamin AΔ10 upregulation. However, lamin AΔ10 upregulation is associated with a more carcinogenic and aggressive tumor phenotype. Lamin A or lamin AΔ50 upregulation is associated with a predicted activation of increased cell death and inactivation of carcinogenesis. Thus, different signaling pathways, networks, molecular and cellular functions are activated/inactivated by lamin A/C transcript variants resulting in a large number of laminopathies.

摘要

背景

核纤层蛋白是核纤层的主要成分。由基因的 12 个外显子组成的剪接变体创建了五个已知的转录变体,即核纤层蛋白 A、核纤层蛋白 C、核纤层蛋白 AΔ10、核纤层蛋白 AΔ50 和核纤层蛋白 C2。本研究的主要目的是研究每个核纤层蛋白 A/C 转录变体调控的关键途径、网络、分子和细胞功能的相关性。

方法

采用 Ion AmpliSeq 转录组人类基因表达分析方法对 MCF7 细胞进行分析,这些 MCF7 细胞稳定转染了核纤层蛋白 A/C 转录变体。

结果

核纤层蛋白 A 或核纤层蛋白 AΔ50 的上调与细胞死亡的激活和致癌作用的失活有关,而核纤层蛋白 C 或核纤层蛋白 AΔ10 的上调则激活了致癌作用和细胞死亡。

结论

数据表明核纤层蛋白 C 和核纤层蛋白 AΔ10 具有抗凋亡和抗衰老作用,因为包括凋亡和坏死功能在内的多种功能在核纤层蛋白 C 或核纤层蛋白 AΔ10 上调后被失活。然而,核纤层蛋白 AΔ10 的上调与更具致癌性和侵袭性的肿瘤表型有关。核纤层蛋白 A 或核纤层蛋白 AΔ50 的上调与预测的细胞死亡增加和致癌作用失活有关。因此,不同的信号通路、网络、分子和细胞功能被核纤层蛋白 A/C 转录变体激活/失活,导致大量的核纤层蛋白病。

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