Department of Biology, University of Alabama at Birmingham, 1300 University Blvd., Birmingham, AL 35294, USA.
Department of Biology, University of Alabama at Birmingham, 1300 University Blvd., Birmingham, AL 35294, USA.
Trends Plant Sci. 2023 Dec;28(12):1379-1390. doi: 10.1016/j.tplants.2023.06.011. Epub 2023 Jul 13.
Orphan genes (OGs) are protein-coding genes without a significant sequence similarity in closely related species. Despite their functional importance, very little is known about the underlying molecular mechanisms by which OGs participate in diverse biological processes. Here, we discuss the evolutionary mechanisms of OGs' emergence with relevance to species-specific adaptations. We also provide a mechanistic view of the involvement of OGs in multiple processes, including growth, development, reproduction, and carbon-metabolism-mediated immunity. We highlight the interconnection between OGs and the sucrose nonfermenting 1 (SNF1)-related protein kinases (SnRKs)-target of rapamycin (TOR) signaling axis for phytohormone signaling, nutrient metabolism, and stress responses. Finally, we propose a high-throughput pipeline for OGs' interspecies and intraspecies gene transfer through a transgenic approach for future biotechnological advances.
孤儿基因(OGs)是指在亲缘关系密切的物种中没有显著序列相似性的蛋白质编码基因。尽管它们具有重要的功能,但对于 OGs 参与多种生物过程的潜在分子机制知之甚少。在这里,我们讨论了 OGs 出现的进化机制与物种特异性适应有关。我们还提供了一个机制性的观点,即 OGs 如何参与多种过程,包括生长、发育、繁殖和碳代谢介导的免疫。我们强调了 OGs 与蔗糖非发酵 1(SNF1)相关蛋白激酶(SnRKs)-雷帕霉素靶蛋白(TOR)信号轴之间的相互联系,该信号轴参与植物激素信号转导、营养代谢和应激反应。最后,我们提出了一个高通量的 OG 种间和种内基因转移的流水线,通过转基因方法为未来的生物技术进步提供了可能。