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在胆道闭锁中升高的多免疫球蛋白受体和半乳糖凝集素-3 结合蛋白:揭示了基于蛋白质组学的研究。

Polymeric immunoglobulin receptor and galectin-3-binding protein are raised in biliary atresia: Reveals a proteomic-based study.

机构信息

Departments of Immunopathology, Post Graduate Institute of Medical Education & Research, Chandigarh, India.

Pediatric Surgery, Post Graduate Institute of Medical Education & Research, Chandigarh, India.

出版信息

J Proteomics. 2023 Sep 15;287:104974. doi: 10.1016/j.jprot.2023.104974. Epub 2023 Jul 17.

Abstract

To identify and evaluate differentially expressed plasma proteins in biliary atresia (BA), we performed plasma proteome profiling using liquid chromatography with tandem mass spectrometry (LC-MS/MS) in 20 patients with BA and 10 control children. Serological assays validated the most significant and highly upregulated proteins in a cohort of 45 patients and 15 controls. Bioinformatics tools were used for functional classification and protein-protein interactions of differentially expressed proteins (DEPs). Of 405 proteins detected in patients and 360 in controls, 242 proteins, each with ≥2 unique peptides (total of 3230 peptides), were common in both groups. Compared to controls, 90 proteins in patients were differentially expressed and were dysregulated. Twenty-five were significantly upregulated with polymeric immunoglobulin receptor (PIgR), galectin-3-binding protein (Gal-3BP), complement C2, the most prominent, and 15 had low expression. The bioinformatic analysis revealed functional interaction between DEPs and their role in an inflammatory immune response. Enzyme immunoassay for PIgR and Gal-3BP in patients' plasma showed their levels raised significantly (p = 0.0021 and p = 0.0369, respectively). The PIgR and Gal-3BP are novel proteins upregulated in BA and may be tested further for their utility as potential circulating disease biomarker(s). SIGNIFICANCE: The study shows that plasma PIgR and GAL-3BP levels are significantly raised in infants with BA within the first 3 months of life. If tested in a larger cohort, these proteins may be found to have their diagnostic potential and utility as disease biomarkers. The study also provides valuable information on the involvement of several DEPs in innate immune response, chronic inflammation, and fibrosis. This strengthens the hypothesis that the immune-mediated inflammatory processes are responsible for the progressive nature of BA.

摘要

为了鉴定和评估胆道闭锁(BA)患者血浆中差异表达的蛋白质,我们使用液相色谱串联质谱(LC-MS/MS)对 20 例 BA 患者和 10 例对照儿童的血浆蛋白质组进行了分析。在 45 例患者和 15 例对照的队列中,通过血清学检测验证了最显著和高度上调的蛋白质。使用生物信息学工具对差异表达蛋白(DEPs)进行了功能分类和蛋白-蛋白相互作用分析。在患者中检测到 405 种蛋白质,在对照组中检测到 360 种蛋白质,两组共有 242 种蛋白质,每种蛋白质都有≥2 个独特的肽段(共 3230 个肽段)。与对照组相比,90 种蛋白质在患者中差异表达且失调。其中 25 种显著上调,最显著的是多免疫球蛋白受体(PIgR)、半乳糖凝集素-3 结合蛋白(Gal-3BP)和补体 C2,15 种蛋白表达下调。生物信息学分析显示 DEPs 之间存在功能相互作用及其在炎症免疫反应中的作用。患者血浆中的 PIgR 和 Gal-3BP 酶免疫测定显示其水平显著升高(p=0.0021 和 p=0.0369)。PIgR 和 Gal-3BP 是 BA 中上调的新型蛋白质,可能进一步作为潜在的循环疾病生物标志物进行测试。意义:该研究表明,在 BA 婴儿生命的前 3 个月内,其血浆 PIgR 和 Gal-3BP 水平显著升高。如果在更大的队列中进行测试,这些蛋白质可能被发现具有诊断潜力和疾病生物标志物的应用价值。该研究还提供了关于几个 DEPs 参与固有免疫反应、慢性炎症和纤维化的有价值信息。这加强了这样一种假设,即免疫介导的炎症过程是 BA 进行性的原因。

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