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直接观察到个体天然着丝粒核小体的协调组装。

Direct observation of coordinated assembly of individual native centromeric nucleosomes.

机构信息

Basic Sciences Division, Howard Hughes Medical Institute, Fred Hutchinson Cancer Center, Seattle, WA, USA.

Department of Physiology and Biophysics, University of Washington, Seattle, WA, USA.

出版信息

EMBO J. 2023 Sep 4;42(17):e114534. doi: 10.15252/embj.2023114534. Epub 2023 Jul 20.

Abstract

Eukaryotic chromosome segregation requires the kinetochore, a megadalton-sized machine that forms on specialized centromeric chromatin containing CENP-A, a histone H3 variant. CENP-A deposition requires a chaperone protein HJURP that targets it to the centromere, but it has remained unclear whether HJURP has additional functions beyond CENP-A targeting and why high AT DNA content, which disfavors nucleosome assembly, is widely conserved at centromeres. To overcome the difficulties of studying nucleosome formation in vivo, we developed a microscopy assay that enables direct observation of de novo centromeric nucleosome recruitment and maintenance with single molecule resolution. Using this assay, we discover that CENP-A can arrive at centromeres without its dedicated centromere-specific chaperone HJURP, but stable incorporation depends on HJURP and additional DNA-binding proteins of the inner kinetochore. We also show that homopolymer AT runs in the yeast centromeres are essential for efficient CENP-A deposition. Together, our findings reveal requirements for stable nucleosome formation and provide a foundation for further studies of the assembly and dynamics of native kinetochore complexes.

摘要

真核生物染色体的分离需要动粒,这是一种兆道尔顿大小的机器,形成于含有 CENP-A 的特殊着丝粒染色质上,CENP-A 是组蛋白 H3 的一种变体。CENP-A 的沉积需要一个伴侣蛋白 HJURP,它将其靶向到着丝粒,但 HJURP 是否除了靶向 CENP-A 之外还有其他功能,以及为什么富含 A-T 的 DNA 含量(不利于核小体组装)在着丝粒中广泛保守,这些问题仍然不清楚。为了克服在体内研究核小体形成的困难,我们开发了一种显微镜检测方法,该方法能够以单分子分辨率直接观察从头开始的着丝粒核小体募集和维持。使用该检测方法,我们发现 CENP-A 可以在没有其专用的着丝粒特异性伴侣蛋白 HJURP 的情况下到达着丝粒,但稳定的掺入依赖于 HJURP 和内动粒的其他 DNA 结合蛋白。我们还表明,酵母着丝粒中的同源多聚体 AT 对于有效沉积 CENP-A 是必需的。总之,我们的发现揭示了稳定核小体形成的要求,并为进一步研究天然动粒复合物的组装和动力学提供了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/59a3/10476280/165041d6a1e4/EMBJ-42-e114534-g012.jpg

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