Degiacomi Giulia, Gianibbi Beatrice, Recchia Deborah, Stelitano Giovanni, Truglio Giuseppina Ivana, Marra Paola, Stamilla Alessandro, Makarov Vadim, Chiarelli Laurent Robert, Manetti Fabrizio, Pasca Maria Rosalia
Department of Biology and Biotechnology "Lazzaro Spallanzani", University of Pavia, Pavia 27100, Italy.
Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Siena 53100, Italy.
ACS Omega. 2023 Jul 3;8(28):25209-25220. doi: 10.1021/acsomega.3c02311. eCollection 2023 Jul 18.
Treatment against tuberculosis can lead to the selection of drug-resistant strains. To tackle this serious threat, new targets from are needed to develop novel effective drugs. In this work, we aimed to provide a possible workflow to validate new targets and inhibitors by combining genetic, , and enzymological approaches. CanB is one of the three β-carbonic anhydrases that catalyze the reversible reaction of CO hydration to form HCO and H. To this end, we precisely demonstrated that CanB is essential for the survival of the pathogen by constructing conditional mutants. In addition, to search for CanB inhibitors, conditional mutants were also constructed using the Pip-ON system. By molecular docking and minimum inhibitory concentration assays, we selected three molecules that inhibit the growth of wild-type strain and conditional mutants, thus implementing a target-to-drug approach. The lead compound also showed a bactericidal activity by the time-killing assay. We further studied the interactions of these molecules with CanB using enzymatic assays and differential scanning fluorimetry thermal shift analysis. In conclusion, the compounds identified by the screening proved to have a high affinity as CanB ligands endowed with antitubercular activity.
抗结核治疗可能会导致耐药菌株的产生。为应对这一严重威胁,需要新的靶点来开发新型有效药物。在这项工作中,我们旨在通过结合遗传学、[此处原文缺失相关内容]和酶学方法,提供一种可能的工作流程来验证新靶点和抑制剂。CanB是三种β-碳酸酐酶之一,催化CO水合形成HCO和H的可逆反应。为此,我们通过构建条件突变体精确证明了CanB对病原体的存活至关重要。此外,为了寻找CanB抑制剂,还使用Pip-ON系统构建了条件突变体。通过分子对接和最低抑菌浓度测定,我们选择了三种抑制野生型菌株和条件突变体生长的分子,从而实现了从靶点到药物的方法。通过时间杀菌试验,先导化合物也显示出杀菌活性。我们进一步使用酶学测定和差示扫描荧光热位移分析研究了这些分子与CanB的相互作用。总之,通过筛选鉴定出的化合物被证明作为具有抗结核活性的CanB配体具有高亲和力。